RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 MARVELD2Q8N4S9 558 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 ZNF781Q8N8C0 355 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 CIDECQ96AQ7 238 aaPredicted RBP11.93□□□□□ -0.5
CNOT1-220ENST00000569916 PPCDCQ96CD2 204 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 ELP4Q96EB1 424 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 TMEM41AQ96HV5 264 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 SORT1Q99523 831 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 OSBPL11Q9BXB4 747 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 C20orf27Q9GZN8 174 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 SLC6A15Q9H2J7 730 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 UBQLN3Q9H347 655 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 TP63Q9H3D4 680 aaPredicted RBP11.93□□□□□ -0.5
CNOT1-220ENST00000569916 METTL7AQ9H8H3 244 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 ACKR4Q9NPB9 350 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 KCNK9Q9NPC2 374 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 PNPLA3Q9NST1 481 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 DDX18Q9NVP1 670 aaKnown RBP11.93□□□□□ -0.5
CNOT1-220ENST00000569916 SPRR3Q9UBC9 169 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 TNFRSF10DQ9UBN6 386 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 TRGV5A0A0B4J1U4 118 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 OR6C70A6NIJ9 312 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 BCKDKO14874 412 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 TSPAN2O60636 221 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 REM1O75628 298 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 AGAP20933 346 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 BGNP21810 368 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 GDF1P27539 372 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 MAPK1P28482 360 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 DCTP40126 519 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 MASP1P48740 699 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 SMSP52788 366 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 PSPHP78330 225 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 ART3Q13508 389 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 CDSNQ15517 529 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 GXYLT1Q4G148 440 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 ZNF787Q6DD87 383 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 SLC30A6Q6NXT4 461 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 XKRXQ6PP77 449 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 PACS2Q86VP3 889 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 SLC44A2Q8IWA5 706 aaPredicted RBP11.92□□□□□ -0.5
CNOT1-220ENST00000569916 LIX1Q8N485 282 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 RPRMLQ8N4K4 120 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 OR4N2Q8NGD1 307 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 RNF138Q8WVD3 245 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 MTERF3Q96E29 417 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 COL21A1Q96P44 957 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 C1orf50Q9BV19 199 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 LDAHQ9H6V9 325 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 GALNT9Q9HCQ5 603 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 SH3BP4Q9P0V3 963 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 C15orf41Q9Y2V0 281 aa11.92□□□□□ -0.5
CNOT1-220ENST00000569916 KLF2Q9Y5W3 355 aaPredicted RBP11.92□□□□□ -0.5
CNOT1-220ENST00000569916 UNC79Q9P2D8 2635 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 CACNA1CQ13936 2221 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 PCNX1Q96RV3 2341 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 PRAMEF25A6NGN4 478 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 PRSS44E7EML9 344 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 GNB5O14775 395 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 SNPHO15079 494 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 SCAMP2O15127 329 aaKnown RBP11.91□□□□□ -0.5
CNOT1-220ENST00000569916 ICOSLGO75144 302 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 HPNP05981 417 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 GRK2P25098 689 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 ELAVL4P26378 380 aaKnown RBP11.91□□□□□ -0.5
CNOT1-220ENST00000569916 GRNP28799 593 aaKnown RBP11.91□□□□□ -0.5
CNOT1-220ENST00000569916 PTPN6P29350 595 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 IL12BP29460 328 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 HPCAL1P37235 193 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 SLC1A6P48664 564 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 TRPC1P48995 793 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 CDK9P50750 372 aaKnown RBP11.91□□□□□ -0.5
CNOT1-220ENST00000569916 SNTA1Q13424 505 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 PTGR1Q14914 329 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 PDCD2Q16342 344 aaPredicted RBP11.91□□□□□ -0.5
CNOT1-220ENST00000569916 TIGD3Q6B0B8 471 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 ANGPTL8Q6UXH0 198 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 WDR53Q7Z5U6 358 aaPredicted RBP11.91□□□□□ -0.5
CNOT1-220ENST00000569916 ANKRD42Q8N9B4 389 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 FNDC5Q8NAU1 212 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 OR5M9Q8NGP3 310 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 ZFP28Q8NHY6 868 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 NEIL3Q8TAT5 605 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 SARAFQ96BY9 339 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 TUBGCP3Q96CW5 907 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 TMCO6Q96DC7 493 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 ZBED6CLQ96FA7 236 aaPredicted RBP11.91□□□□□ -0.5
CNOT1-220ENST00000569916 GNRHR2Q96P88 292 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 ADOQ96SZ5 270 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 LMF2Q9BU23 707 aaKnown RBP11.91□□□□□ -0.5
CNOT1-220ENST00000569916 EXO5Q9H790 373 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 ACSS1Q9NUB1 689 aaPredicted RBP11.91□□□□□ -0.5
CNOT1-220ENST00000569916 KLRF1Q9NZS2 232 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 ATP6V1HQ9UI12 483 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 HAO1Q9UJM8 370 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 RAP2CQ9Y3L5 183 aa11.91□□□□□ -0.5
CNOT1-220ENST00000569916 TMEM120BA0PK00 339 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 C2orf72A6NCS6 295 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 FIGNL2A6NMB9 653 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 SNUPNO95149 360 aaKnown RBP11.9□□□□□ -0.5
CNOT1-220ENST00000569916 CLDN14O95500 239 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms