RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 ZNF701M0R085 212 aaPredicted RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 PSMD11O00231 422 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 CLDN5O00501 218 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 ARPC2O15144 300 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 ZSCAN12O43309 604 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 CHMP2AO43633 222 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 TIMM8AO60220 97 aaPredicted RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 DFFBO76075 338 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 TGM6O95932 706 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 GOT2P00505 430 aaKnown RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 MBP02144 154 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 KRT6AP02538 564 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 GSTT2P0CG29 244 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 GSTT2BP0CG30 244 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 ACP2P11117 423 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 NCK1P16333 377 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 TUBG1P23258 451 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 CYLC1P35663 651 aaPredicted RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 ACADSBP45954 432 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 RPS5P46782 204 aaKnown RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 VAMP7P51809 220 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 CSNK2BP67870 215 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 NOP14P78316 857 aaKnown RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 IRX1P78414 480 aaPredicted RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 CX3CL1P78423 397 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 XIAPP98170 497 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 KLC1Q07866 573 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 CHRNA6Q15825 494 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 FAM83EQ2M2I3 478 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 HNRNPA1L2Q32P51 320 aaKnown RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 SNRNP48Q6IEG0 339 aaKnown RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 RNASEKQ6P5S7 137 aaKnown RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 WASH2PQ6VEQ5 465 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 DPY19L4Q7Z388 723 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 CPEB2Q7Z5Q1 589 aaKnown RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 CD302Q8IX05 232 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 RNF113BQ8IZP6 322 aaKnown RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 CRYBG2Q8N1P7 616 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 GBGT1Q8N5D6 347 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 CEP112Q8N8E3 955 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 OR11H4Q8NGC9 324 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 OR13J1Q8NGT2 312 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 SLC38A5Q8WUX1 472 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 ZNF707Q96C28 371 aaPredicted RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 COQ2Q96H96 371 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 RBM41Q96IZ5 413 aaKnown RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 TECTBQ96PL2 329 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 OMDQ99983 421 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 CENPKQ9BS16 269 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 NDUFAF3Q9BU61 184 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 TRAF4Q9BUZ4 470 aaPredicted RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 TSSK1BQ9BXA7 367 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 SPATA16Q9BXB7 569 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 ROGDIQ9GZN7 287 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 MIS12Q9H081 205 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 C5orf66Q9H5L9 145 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 DHX33Q9H6R0 707 aaKnown RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 C8orf33Q9H7E9 229 aaPredicted RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 GEMIN7Q9H840 131 aaKnown RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 TUBG2Q9NRH3 451 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 KLHL9Q9P2J3 617 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 LHX3Q9UBR4 397 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 DBF4Q9UBU7 674 aaPredicted RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 ZNF346Q9UL40 294 aaKnown RBP4.16□□□□□ -1.74
CHD9-220ENST00000569794 CA5BQ9Y2D0 317 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 ZMYM6O95789 1325 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 AKNAQ7Z591 1439 aa4.15□□□□□ -1.74
CHD9-220ENST00000569794 A0A1W2PP11 408 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 RNF222A6NCQ9 220 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 C15orf62A8K5M9 175 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 C12orf71A8MTZ7 269 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 C9JVG2 144 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 CCL24O00175 119 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 WWP2O00308 870 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 NR5A2O00482 541 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 GAPDHSO14556 408 aaPredicted RBP4.15□□□□□ -1.75
CHD9-220ENST00000569794 TRDMT1O14717 391 aaKnown RBP4.15□□□□□ -1.75
CHD9-220ENST00000569794 CLPXO76031 633 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 APOA1P02647 267 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 H1F0P07305 194 aaKnown RBP4.15□□□□□ -1.75
CHD9-220ENST00000569794 CT45A8P0DMV1 189 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 CT45A9P0DMV2 189 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 GP9P14770 177 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 CPN1P15169 458 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 HPGDP15428 266 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 TNNI1P19237 187 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 MSH3P20585 1137 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 MSR1P21757 451 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 FCARP24071 287 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 ALDH1B1P30837 517 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 OR3A3P47888 321 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 NPY2RP49146 381 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 CSNK1EP49674 416 aaKnown RBP4.15□□□□□ -1.75
CHD9-220ENST00000569794 KRTAP10-8P60410 259 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 BDH1Q02338 343 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 SP3Q02447 781 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 MAB21L1Q13394 359 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 XRCC4Q13426 336 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 ANGPT1Q15389 498 aa4.15□□□□□ -1.75
CHD9-220ENST00000569794 MTHFSDQ2M296 383 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms