RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 REEP5Q00765 189 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 HMGCS1Q01581 520 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 RASGEF1BQ0VAM2 473 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 ZP4Q12836 540 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 NAE1Q13564 534 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 KRT31Q15323 416 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 SLC9A3R2Q15599 337 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 STK11Q15831 433 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 ZNF628Q5EBL2 1059 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 TCHHL1Q5QJ38 904 aaPredicted RBP5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 CASC10Q5T4H9 136 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 TSTD2Q5T7W7 516 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 ZNF470Q6ECI4 717 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 AGTRAPQ6RW13 159 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 KLHL17Q6TDP4 642 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 CYHR1Q6ZMK1 362 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 SLC46A3Q7Z3Q1 461 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 RELL1Q8IUW5 271 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 KLHDC8AQ8IYD2 350 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 MPP5Q8N3R9 675 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 C17orf47Q8NEP4 570 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 WDR60Q8WVS4 1066 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 NEU4Q8WWR8 484 aaPredicted RBP5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 PEX13Q92968 403 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 PPWD1Q96BP3 646 aaKnown RBP5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 SNF8Q96H20 258 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 ERGIC2Q96RQ1 377 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 OCSTAMPQ9BR26 566 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 DDX47Q9H0S4 455 aaKnown RBP5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 RAB1BQ9H0U4 201 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 LYRM4Q9HD34 91 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 PAQR5Q9NXK6 330 aaPredicted RBP5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 TAS2R16Q9NYV7 291 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 MARCH4Q9P2E8 410 aaPredicted RBP5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 GALPQ9UBC7 116 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 LCMT1Q9UIC8 334 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 FBXO9Q9UK97 447 aaPredicted RBP5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 ATP23Q9Y6H3 246 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 A0A0G2JMP0 313 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 A0A0X1KG70 313 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 LRIT2A6NDA9 550 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 RBMY1BA6NDE4 496 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 RBMY1EA6NEQ0 496 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 PRAMEF25A6NGN4 478 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 B4DXG7 233 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 ZNF814B7Z6K7 855 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 CD3EAPO15446 510 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 PJA2O43164 708 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 DHHO43323 396 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 FGF17O60258 216 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 NDUFS3O75489 264 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 CLPXO76031 633 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 NDUFA7O95182 113 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 SLU7O95391 586 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 TPM2P07951 284 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 CSF1P09603 554 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 RBMY1DP0C7P1 496 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 ANPEPP15144 967 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 ZNF17P17021 662 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 TCEA1P23193 301 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 HNRNPH1P31943 449 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 PCGF2P35227 344 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 RPL22P35268 128 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 CDKN2BP42772 138 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 PPOXP50336 477 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 PLIN5Q00G26 463 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 SP140Q13342 867 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 CSHL1Q14406 222 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 ZNF267Q14586 743 aaPredicted RBP5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 PLECQ15149 4684 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 HLA-DQA1Q5Y7H0 255 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 GTF2IRD2BQ6EKJ0 949 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 DESI1Q6ICB0 168 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 MFSD7Q6UXD7 560 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 SLCO4C1Q6ZQN7 724 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 SPATC1Q76KD6 591 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 GTF2IRD2Q86UP8 949 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 PRR22Q8IZ63 422 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 ST13P4Q8IZP2 240 aaPredicted RBP5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 PRELID2Q8N945 189 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 BBOF1Q8ND07 529 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 OR4M2Q8NGB6 313 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 OR2W6PQ8NHA6 318 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 FAM136AQ96C01 138 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 ZNF778Q96MU6 729 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 OR4K3Q96R72 315 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 AIF1LQ9BQI0 150 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 LRRC40Q9H9A6 602 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 FKRPQ9H9S5 495 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 PIH1D1Q9NWS0 290 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 GAR1Q9NY12 217 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 CHMP5Q9NZZ3 219 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 KLHL42Q9P2K6 505 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 MCTS1Q9ULC4 181 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 PCDHGB5Q9Y5G0 923 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 AP4B1Q9Y6B7 739 aa5.76□□□□□ -1.49
HERPUD1-217ENST00000569429 OR2M5A3KFT3 312 aa5.75□□□□□ -1.49
HERPUD1-217ENST00000569429 OR5H1A6NKK0 313 aa5.75□□□□□ -1.49
HERPUD1-217ENST00000569429 B9A039 149 aa5.75□□□□□ -1.49
HERPUD1-217ENST00000569429 H3BML4 177 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms