RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 DUSP5Q16690 384 aa16.96■□□□□ 0.31
SMPD3-211ENST00000568373 DEFB110Q30KQ9 67 aa16.96■□□□□ 0.31
SMPD3-211ENST00000568373 INAVAQ3KP66 663 aa16.96■□□□□ 0.31
SMPD3-211ENST00000568373 AVL9Q8NBF6 648 aa16.96■□□□□ 0.31
SMPD3-211ENST00000568373 MORN4Q8NDC4 146 aa16.96■□□□□ 0.31
SMPD3-211ENST00000568373 OR4K5Q8NGD3 323 aa16.96■□□□□ 0.31
SMPD3-211ENST00000568373 OR52P1PQ8NH57 321 aa16.96■□□□□ 0.31
SMPD3-211ENST00000568373 NR4A3Q92570 626 aa16.96■□□□□ 0.31
SMPD3-211ENST00000568373 C11orf16Q9NQ32 467 aa16.96■□□□□ 0.31
SMPD3-211ENST00000568373 GPR83Q9NYM4 423 aa16.96■□□□□ 0.31
SMPD3-211ENST00000568373 NDOR1Q9UHB4 597 aa16.96■□□□□ 0.31
SMPD3-211ENST00000568373 GPR55Q9Y2T6 319 aaPredicted RBP16.96■□□□□ 0.31
SMPD3-211ENST00000568373 A0A087WV62 115 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 SH3D21A4FU49 640 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 KRBA1A5PL33 1030 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 H3BN98 237 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 SGK494L7N484 410 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 LCKP06239 509 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 ACP2P11117 423 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 DCTN2Q13561 401 aaKnown RBP16.95■□□□□ 0.3
SMPD3-211ENST00000568373 SPCS2Q15005 226 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 ARHGAP11BQ3KRB8 267 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 SLX4IPQ5VYV7 408 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 KLHL35Q6PF15 583 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 CD300LDQ6UXZ3 194 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 GJD3Q8N144 294 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 ARHGEF39Q8N4T4 335 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 MTHFD2LQ9H903 347 aaPredicted RBP16.95■□□□□ 0.3
SMPD3-211ENST00000568373 CTPS2Q9NRF8 586 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 SELENONQ9NZV5 590 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 MKLN1Q9UL63 735 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 FAM170BA6NMN3 283 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 TLR4O00206 839 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 PLOD3O60568 738 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 IGFBP1P08833 259 aaPredicted RBP16.95■□□□□ 0.3
SMPD3-211ENST00000568373 NT5EP21589 574 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 MMP11P24347 488 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 TAS2R41P59536 307 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 COX10Q12887 443 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 BNIP3Q12983 259 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 NDUFA9Q16795 377 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 ZER1Q7Z7L7 766 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 IQCHQ86VS3 1027 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 P2RY8Q86VZ1 359 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 GKN2Q86XP6 184 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 ARL14Q8N4G2 192 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 TBC1D15Q8TC07 691 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 FOXQ1Q9C009 403 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 CLN6Q9NWW5 311 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 KLHL28Q9NXS3 571 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 CLCA2Q9UQC9 943 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 WDR45Q9Y484 360 aa16.95■□□□□ 0.3
SMPD3-211ENST00000568373 SLC9B1P1A6NJY1 282 aa16.94■□□□□ 0.3
SMPD3-211ENST00000568373 FRS3O43559 492 aa16.94■□□□□ 0.3
SMPD3-211ENST00000568373 TP53P04637 393 aaPredicted RBP16.94■□□□□ 0.3
SMPD3-211ENST00000568373 CTSBP07858 339 aa16.94■□□□□ 0.3
SMPD3-211ENST00000568373 RAB38P57729 211 aa16.94■□□□□ 0.3
SMPD3-211ENST00000568373 ALDH6A1Q02252 535 aaKnown RBP16.94■□□□□ 0.3
SMPD3-211ENST00000568373 EXOSC6Q5RKV6 272 aaKnown RBP16.94■□□□□ 0.3
SMPD3-211ENST00000568373 TYW3Q6IPR3 259 aaKnown RBP16.94■□□□□ 0.3
SMPD3-211ENST00000568373 C1orf94Q6P1W5 598 aa16.94■□□□□ 0.3
SMPD3-211ENST00000568373 MCATQ8IVS2 390 aaKnown RBP16.94■□□□□ 0.3
SMPD3-211ENST00000568373 CADM4Q8NFZ8 388 aa16.94■□□□□ 0.3
SMPD3-211ENST00000568373 LMX1AQ8TE12 382 aa16.94■□□□□ 0.3
SMPD3-211ENST00000568373 PCED1AQ9H1Q7 454 aa16.94■□□□□ 0.3
SMPD3-211ENST00000568373 PIGUQ9H490 435 aa16.94■□□□□ 0.3
SMPD3-211ENST00000568373 ANKHQ9HCJ1 492 aa16.94■□□□□ 0.3
SMPD3-211ENST00000568373 ADAP2Q9NPF8 381 aa16.94■□□□□ 0.3
SMPD3-211ENST00000568373 PRDM6Q9NQX0 595 aa16.94■□□□□ 0.3
SMPD3-211ENST00000568373 IFT52Q9Y366 437 aa16.94■□□□□ 0.3
SMPD3-211ENST00000568373 TMEM131Q92545 1883 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 RDH16O75452 317 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 STSP08842 583 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 MAOBP27338 520 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 CAPZBP47756 277 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 SNRPGP62308 76 aaKnown RBP16.93■□□□□ 0.3
SMPD3-211ENST00000568373 RACK1P63244 317 aaKnown RBP16.93■□□□□ 0.3
SMPD3-211ENST00000568373 ST3GAL4Q11206 333 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 PRICKLE4Q2TBC4 344 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 PUS10Q3MIT2 529 aaKnown RBP16.93■□□□□ 0.3
SMPD3-211ENST00000568373 C12orf73Q69YU5 71 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 PEX5LQ8IYB4 626 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 CLIP4Q8N3C7 705 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 STX19Q8N4C7 294 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 B3GNT7Q8NFL0 401 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 OR9A4Q8NGU2 314 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 ZNF675Q8TD23 568 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 DOK4Q8TEW6 326 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 SLC38A4Q969I6 547 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 SDF2Q99470 211 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 PRR14Q9BWN1 585 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 ITPAQ9BY32 194 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 UCK1Q9HA47 277 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 DOLKQ9UPQ8 538 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 ZNF443Q9Y2A4 671 aaPredicted RBP16.93■□□□□ 0.3
SMPD3-211ENST00000568373 EFCAB10A6NFE3 127 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 SLC22A1O15245 554 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 FOXD2O60548 495 aaPredicted RBP16.93■□□□□ 0.3
SMPD3-211ENST00000568373 CYP7B1O75881 506 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 IFI6P09912 130 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms