RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 NPIPA7E9PJI5 369 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 H0YIG0 161 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 BCKDKO14874 412 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 PLOD3O60568 738 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 DNAJB5O75953 348 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 CPNE6O95741 557 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 RECKO95980 971 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 AGR2O95994 175 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 NPIPA8P0DM63 369 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 EPHA2P29317 976 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 MAGEA8P43361 318 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 COLEC12Q5KU26 742 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 KDM4DQ6B0I6 523 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 WDR74Q6RFH5 385 aaPredicted RBP6.59□□□□□ -1.35
SMG1-215ENST00000568239 CDRT4Q8N9R6 151 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 OR6T1Q8NGN1 323 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 ATOH1Q92858 354 aaPredicted RBP6.59□□□□□ -1.35
SMG1-215ENST00000568239 BTBD2Q9BX70 525 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 PIGUQ9H490 435 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 TRIM45Q9H8W5 580 aaPredicted RBP6.59□□□□□ -1.35
SMG1-215ENST00000568239 ZNF556Q9HAH1 456 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 CXorf21Q9HAI6 301 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 PNO1Q9NRX1 252 aaKnown RBP6.59□□□□□ -1.35
SMG1-215ENST00000568239 TMCC3Q9ULS5 477 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 SLC6A14Q9UN76 642 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 ERVK-19Q9WJR5 959 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 PCDHGA8Q9Y5G5 932 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 MN1Q10571 1320 aaPredicted RBP6.59□□□□□ -1.35
SMG1-215ENST00000568239 A0A087WV62 115 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 A0A1W2PQM1 296 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 A6NHS1 94 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 H3BNH8 94 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 ARHGAP33O14559 1287 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 FFAR1O14842 300 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 OR10H3O60404 316 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 SEMA7AO75326 666 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 UGT2B17O75795 530 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 CCNB2O95067 398 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 CER1O95813 267 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 PABPC4LP0CB38 370 aaKnown RBP6.59□□□□□ -1.35
SMG1-215ENST00000568239 HOXC5Q00444 222 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 RAPSNQ13702 412 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 ZNHIT3Q15649 155 aaPredicted RBP6.59□□□□□ -1.35
SMG1-215ENST00000568239 MEP1AQ16819 746 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 MICAQ29983 383 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 VWA2Q5GFL6 755 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 DCST2Q5T1A1 773 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 PHF19Q5T6S3 580 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 ARHGAP40Q5TG30 622 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 TCEAL6Q6IPX3 200 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 ZNF574Q6ZN55 896 aaPredicted RBP6.59□□□□□ -1.35
SMG1-215ENST00000568239 THAP5Q7Z6K1 395 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 PEX5LQ8IYB4 626 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 TCEAL3Q969E4 200 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 SLC41A2Q96JW4 573 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 SDF2Q99470 211 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 NIPSNAP1Q9BPW8 284 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 FNDC11Q9BVV2 318 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 GABARAPL1Q9H0R8 117 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 ZNF696Q9H7X3 374 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 ZNF304Q9HCX3 659 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 FBXO34Q9NWN3 711 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 AASSQ9UDR5 926 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 ZNF232Q9UNY5 417 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 GMPPBQ9Y5P6 360 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 TNRC6BQ9UPQ9 1833 aaKnown RBP6.59□□□□□ -1.35
SMG1-215ENST00000568239 CACNA1HO95180 2353 aa6.59□□□□□ -1.35
SMG1-215ENST00000568239 CFAP54Q96N23 3096 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 TRBV4-1A0A0J9YWV2 114 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 GXYLT2A0PJZ3 443 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 FITM1A5D6W6 292 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 CCDC160A6NGH7 325 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 COQ9O75208 318 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 STX11O75558 287 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 ZIC2O95409 532 aaPredicted RBP6.58□□□□□ -1.36
SMG1-215ENST00000568239 CBX7O95931 251 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 H1F0P07305 194 aaKnown RBP6.58□□□□□ -1.36
SMG1-215ENST00000568239 SYPP08247 313 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 SMIM18P0DKX4 95 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 POU1F1P28069 291 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 MGAT2Q10469 447 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 NR1D2Q14995 579 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 DCST1Q5T197 706 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 FHL5Q5TD97 284 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 FRRS1Q6ZNA5 592 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 Q6ZPB1 254 aaPredicted RBP6.58□□□□□ -1.36
SMG1-215ENST00000568239 SHISA6Q6ZSJ9 500 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 USP51Q70EK9 711 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 KANSL1Q7Z3B3 1105 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 SATL1Q86VE3 508 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 CLIP4Q8N3C7 705 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 AQP11Q8NBQ7 271 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 CEP76Q8TAP6 659 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 RNF217Q8TC41 542 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 IFI44Q8TCB0 444 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 ZNF675Q8TD23 568 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 ADAMTS18Q8TE60 1221 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 NAT6Q93015 286 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 ZC3H10Q96K80 434 aaKnown RBP6.58□□□□□ -1.36
SMG1-215ENST00000568239 CNDP2Q96KP4 475 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms