RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 PSMB5P28074 263 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 FGF9P31371 208 aaPredicted RBP15.75■□□□□ 0.11
CMTM3-213ENST00000566756 DDOSTP39656 456 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 ETV5P41161 510 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 TSFMP43897 325 aaKnown RBP15.75■□□□□ 0.11
CMTM3-213ENST00000566756 RFX2P48378 723 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 ETV1P50549 477 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 NCBP2P52298 156 aaKnown RBP eCLIP15.75■□□□□ 0.11
CMTM3-213ENST00000566756 FOXD4Q12950 439 aaPredicted RBP15.75■□□□□ 0.11
CMTM3-213ENST00000566756 SLC9A5Q14940 896 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 CARTPTQ16568 116 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 MRM1Q6IN84 353 aaKnown RBP15.75■□□□□ 0.11
CMTM3-213ENST00000566756 ACSM5Q6NUN0 579 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 IQCF1Q8N6M8 205 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 LINC01555Q8NAE3 123 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 OR5D16Q8NGK9 328 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 ASB12Q8WXK4 309 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 KCTD7Q96MP8 289 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 BBS4Q96RK4 519 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 COQ7Q99807 217 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 KDM4EB2RXH2 506 aaPredicted RBP15.74■□□□□ 0.11
CMTM3-213ENST00000566756 LCMT2O60294 686 aaKnown RBP15.74■□□□□ 0.11
CMTM3-213ENST00000566756 CDRT1O95170 752 aa15.74■□□□□ 0.11
CMTM3-213ENST00000566756 FHP07954 510 aa15.74■□□□□ 0.11
CMTM3-213ENST00000566756 CHRM4P08173 479 aa15.74■□□□□ 0.11
CMTM3-213ENST00000566756 RGS19P49795 217 aa15.74■□□□□ 0.11
CMTM3-213ENST00000566756 TSPAN31Q12999 210 aa15.74■□□□□ 0.11
CMTM3-213ENST00000566756 FGL2Q14314 439 aa15.74■□□□□ 0.11
CMTM3-213ENST00000566756 SNAPC1Q16533 368 aa15.74■□□□□ 0.11
CMTM3-213ENST00000566756 SLC27A4Q6P1M0 643 aa15.74■□□□□ 0.11
CMTM3-213ENST00000566756 CD200R1LQ6Q8B3 271 aa15.74■□□□□ 0.11
CMTM3-213ENST00000566756 RASSF6Q6ZTQ3 369 aa15.74■□□□□ 0.11
CMTM3-213ENST00000566756 SPATC1Q76KD6 591 aa15.74■□□□□ 0.11
CMTM3-213ENST00000566756 TEX47Q8TBZ9 253 aa15.74■□□□□ 0.11
CMTM3-213ENST00000566756 GANCQ8TET4 914 aa15.74■□□□□ 0.11
CMTM3-213ENST00000566756 SLC38A2Q96QD8 506 aa15.74■□□□□ 0.11
CMTM3-213ENST00000566756 SARGQ9BW04 601 aa15.74■□□□□ 0.11
CMTM3-213ENST00000566756 C1QTNF7Q9BXJ2 289 aa15.74■□□□□ 0.11
CMTM3-213ENST00000566756 MBNL1Q9NR56 388 aaKnown RBP15.74■□□□□ 0.11
CMTM3-213ENST00000566756 CALML5Q9NZT1 146 aa15.74■□□□□ 0.11
CMTM3-213ENST00000566756 SF3B6Q9Y3B4 125 aaKnown RBP15.74■□□□□ 0.11
CMTM3-213ENST00000566756 SLC30A4O14863 429 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 PAK4O96013 591 aaPredicted RBP15.73■□□□□ 0.11
CMTM3-213ENST00000566756 TSPAN19P0C672 248 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 MSL3P1P0C860 447 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 GABRA5P31644 462 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 RAB28P51157 221 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 ADPRHP54922 357 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 ABATP80404 500 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 IFITM2Q01629 132 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 FUT5Q11128 374 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 SGCGQ13326 291 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 IRF4Q15306 451 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 BAK1Q16611 211 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 EOGTQ5NDL2 527 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 DDI2Q5TDH0 399 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 PAQR6Q6TCH4 344 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 ZNF793Q6ZN11 406 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 QSOX2Q6ZRP7 698 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 BCDIN3DQ7Z5W3 292 aaKnown RBP15.73■□□□□ 0.11
CMTM3-213ENST00000566756 AMER3Q8N944 861 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 OR2A1Q8NGT9 310 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 OR2L8Q8NGY9 312 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 OR14C36Q8NHC7 312 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 SIPA1Q96FS4 1042 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 ARHGDIGQ99819 225 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 SLC17A9Q9BYT1 436 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 SLC22A4Q9H015 551 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 PLEKHB1Q9UF11 243 aaPredicted RBP15.73■□□□□ 0.11
CMTM3-213ENST00000566756 LIPT1Q9Y234 373 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 GSTK1Q9Y2Q3 226 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 ASB4Q9Y574 426 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 XIRP2A4UGR9 3374 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 FAM172BPA6NC97 362 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 SHISA7A6NL88 538 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 WWP2O00308 870 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 SSX4O60224 188 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 KCNJ13O60928 360 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 UBXN7O94888 489 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 IFNA8P32881 189 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 AHRP35869 848 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 CLCNKAP51800 687 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 CCINQ13939 588 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 TRAM2Q15035 370 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 CEBPEQ15744 281 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 KIF18BQ86Y91 864 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 GPA33Q99795 319 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 C17orf62Q9BQA9 187 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 LGR4Q9BXB1 951 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 AICDAQ9GZX7 198 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 MIXL1Q9H2W2 232 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 WDR26Q9H7D7 661 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 PHPT1Q9NRX4 125 aaPredicted RBP15.73■□□□□ 0.11
CMTM3-213ENST00000566756 MED17Q9NVC6 651 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 NCKAP1Q9Y2A7 1128 aa15.73■□□□□ 0.11
CMTM3-213ENST00000566756 SPIN1Q9Y657 262 aaPredicted RBP15.73■□□□□ 0.11
CMTM3-213ENST00000566756 NINQ8N4C6 2090 aa15.72■□□□□ 0.11
CMTM3-213ENST00000566756 IGKV1-8A0A0C4DH67 115 aa15.72■□□□□ 0.11
CMTM3-213ENST00000566756 A0A1W2PQU0 124 aa15.72■□□□□ 0.11
CMTM3-213ENST00000566756 PLD2O14939 933 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms