RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 PINX1Q96BK5 328 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 ECHDC3Q96DC8 303 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 WDR92Q96MX6 357 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 ZNF578Q96N58 590 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 SERPINB12Q96P63 405 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 MS4A10Q96PG2 267 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 QKIQ96PU8 341 aaKnown RBP eCLIP2.88□□□□□ -1.95
CHD9-216ENST00000565803 MIS12Q9H081 205 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 PIGUQ9H490 435 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 KLHL31Q9H511 634 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CXorf36Q9H7Y0 433 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CSNK1G1Q9HCP0 422 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 GCM1Q9NP62 436 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 DNMT3BQ9UBC3 853 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 ZNF282Q9UDV7 671 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 CLEC2DQ9UHP7 191 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 UTS2RQ9UKP6 389 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 FBXL3Q9UKT7 428 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 ERGIC3Q9Y282 383 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 ASB1Q9Y576 335 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CAPN6Q9Y6Q1 641 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CCDC171Q6TFL3 1326 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 NPIPB5A8MRT5 1133 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 E7EWF7 191 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 PPIAL4DF5H284 164 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 PDLIM1O00151 329 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 PSMD12O00232 456 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 EIF4EBP3O60516 100 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 LDOC1O95751 146 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 F10P00742 488 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 IFNA21P01568 189 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 RPN2P04844 631 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 TRIM49P0CI25 452 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 TRIM49CP0CI26 452 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CCNB1P14635 433 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CD1CP29017 333 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 NTF4P34130 210 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 AQP2P41181 271 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 RABGGTBP53611 331 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 MAPK12P53778 367 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CDH4P55283 916 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 WNT3AP56704 352 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CXCR4P61073 352 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 LCN2P80188 198 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 OCA2Q04671 838 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 RAB31Q13636 194 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 STXBP2Q15833 593 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 LRRC36Q1X8D7 754 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 TIGD5Q53EQ6 642 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 LACTB2Q53H82 288 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 DMRTC1Q5HYR2 192 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 SAMD4BQ5PRF9 694 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 MROH9Q5TGP6 573 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 BICRALQ6AI39 1079 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 TCEAL6Q6IPX3 200 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CCDC144NLQ6NUI1 221 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 FAM171BQ6P995 826 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 SLC27A1Q6PCB7 646 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 DPY19L3Q6ZPD9 716 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CFAP77Q6ZQR2 320 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 SLC26A9Q7LBE3 791 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 P4HA3Q7Z4N8 544 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 ZNF554Q86TJ5 538 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 PLA2G4DQ86XP0 818 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 PALB2Q86YC2 1186 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 ADGRG5Q8IZF4 528 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 ELMOD1Q8N336 334 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 GTPBP8Q8N3Z3 284 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 ZNF655Q8N720 491 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 INO80EQ8NBZ0 244 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 SLC37A3Q8NCC5 494 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 PDPRQ8NCN5 879 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 ADAMTS16Q8TE57 1224 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 LRRC15Q8TF66 581 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 SLC44A1Q8WWI5 657 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 XAGE5Q8WWM1 108 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 NPIPB3Q92617 1050 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 LPPQ93052 612 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 NTAN1Q96AB6 310 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 TMA16Q96EY4 203 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 FOXN4Q96NZ1 517 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 UBL7Q96S82 380 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 CPNE1Q99829 537 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 MICU1Q9BPX6 476 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 C17orf62Q9BQA9 187 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 DUSP16Q9BY84 665 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 ULBP2Q9BZM5 246 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 TRIM9Q9C026 710 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 NXF5Q9H1B4 397 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 ASB8Q9H765 288 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 MKKSQ9NPJ1 570 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 INIPQ9NRY2 104 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 KIAA1456Q9P272 454 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 TMCO1Q9UM00 188 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 MAP3K2Q9Y2U5 619 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 ASB4Q9Y574 426 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.87□□□□□ -1.95
CHD9-216ENST00000565803 A0A1B0GV72 72 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 TCRBV7S3A2A0A539 114 aa2.87□□□□□ -1.95
CHD9-216ENST00000565803 VSTM2BA6NLU5 285 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms