RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ZNF639Q9UID6 485 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 SLC6A5Q9Y345 797 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 POLR3HQ9Y535 204 aaPredicted RBP16.88■□□□□ 0.29
CLN6-204ENST00000564752 NCKAP5O14513 1909 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 TRIM13O60858 407 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 DIAPH2O60879 1101 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 PPM1BO75688 479 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 IL2RAP01589 272 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 BMP7P18075 431 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 PTPN6P29350 595 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 SOX18P35713 384 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 ASCL1P50553 236 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 FBXL19-AS1Q494R0 122 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 TRMT12Q53H54 448 aaKnown RBP16.87■□□□□ 0.29
CLN6-204ENST00000564752 EIPR1Q53HC9 387 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 ZNF628Q5EBL2 1059 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 NSUN5P2Q63ZY6 315 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 CLEC6AQ6EIG7 209 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 TMEM81Q6P7N7 255 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 OR9A2Q8NGT5 310 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 NINJ1Q92982 152 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 RNASE6Q93091 150 aaKnown RBP16.87■□□□□ 0.29
CLN6-204ENST00000564752 HGDQ93099 445 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 WDYHV1Q96HA8 205 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 FAM111AQ96PZ2 611 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 TRMOQ9BU70 441 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 GATA5Q9BWX5 397 aaPredicted RBP16.87■□□□□ 0.29
CLN6-204ENST00000564752 UGT2B28Q9BY64 529 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 POLDIP3Q9BY77 421 aaKnown RBP16.87■□□□□ 0.29
CLN6-204ENST00000564752 ROPN1BQ9BZX4 212 aaPredicted RBP16.87■□□□□ 0.29
CLN6-204ENST00000564752 ROPN1Q9HAT0 212 aaPredicted RBP16.87■□□□□ 0.29
CLN6-204ENST00000564752 MIEF1Q9NQG6 463 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 SLC35C2Q9NQQ7 365 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 RASSF1Q9NS23 344 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 SENP1Q9P0U3 644 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 FIS1Q9Y3D6 152 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 AKAP6Q13023 2319 aa16.87■□□□□ 0.29
CLN6-204ENST00000564752 GNB5O14775 395 aa16.86■□□□□ 0.29
CLN6-204ENST00000564752 DDCP20711 480 aa16.86■□□□□ 0.29
CLN6-204ENST00000564752 ZNF136P52737 540 aa16.86■□□□□ 0.29
CLN6-204ENST00000564752 C2orf80Q0P641 193 aa16.86■□□□□ 0.29
CLN6-204ENST00000564752 PLCXD2Q0VAA5 305 aa16.86■□□□□ 0.29
CLN6-204ENST00000564752 ERCC6LQ2NKX8 1250 aa16.86■□□□□ 0.29
CLN6-204ENST00000564752 WIPI1Q5MNZ9 446 aaPredicted RBP16.86■□□□□ 0.29
CLN6-204ENST00000564752 NUP54Q7Z3B4 507 aa16.86■□□□□ 0.29
CLN6-204ENST00000564752 FAM9CQ8IZT9 166 aa16.86■□□□□ 0.29
CLN6-204ENST00000564752 SIMC1Q8NDZ2 872 aa16.86■□□□□ 0.29
CLN6-204ENST00000564752 OR1J4Q8NGS1 313 aa16.86■□□□□ 0.29
CLN6-204ENST00000564752 FAM76AQ8TAV0 307 aa16.86■□□□□ 0.29
CLN6-204ENST00000564752 ABTB1Q969K4 478 aaPredicted RBP16.86■□□□□ 0.29
CLN6-204ENST00000564752 HSPBAP1Q96EW2 488 aa16.86■□□□□ 0.29
CLN6-204ENST00000564752 LRRC46Q96FV0 321 aa16.86■□□□□ 0.29
CLN6-204ENST00000564752 LCORQ96JN0 433 aaPredicted RBP16.86■□□□□ 0.29
CLN6-204ENST00000564752 GPATCH1Q9BRR8 931 aaKnown RBP16.86■□□□□ 0.29
CLN6-204ENST00000564752 CXXC4Q9H2H0 198 aa16.86■□□□□ 0.29
CLN6-204ENST00000564752 METTL7AQ9H8H3 244 aa16.86■□□□□ 0.29
CLN6-204ENST00000564752 MYNNQ9NPC7 610 aa16.86■□□□□ 0.29
CLN6-204ENST00000564752 FOXD3Q9UJU5 478 aaPredicted RBP16.86■□□□□ 0.29
CLN6-204ENST00000564752 CAMK2AQ9UQM7 478 aa16.86■□□□□ 0.29
CLN6-204ENST00000564752 CD8B2A6NJW9 211 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 AZIN1O14977 448 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 ACOX3O15254 700 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 SPAG7O75391 227 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 BCAS2O75934 225 aaPredicted RBP16.85■□□□□ 0.29
CLN6-204ENST00000564752 CHEK2O96017 543 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 PTGDSP41222 190 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 DCAF7P61962 342 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 TOMM20Q15388 145 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 DCST1Q5T197 706 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 DESI1Q6ICB0 168 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 SLC30A6Q6NXT4 461 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 FAM83FQ8NEG4 500 aaPredicted RBP16.85■□□□□ 0.29
CLN6-204ENST00000564752 FAM222BQ8WU58 562 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 KAT2AQ92830 837 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 ERP27Q96DN0 273 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 OMA1Q96E52 524 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 BBS4Q96RK4 519 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 NODALQ96S42 347 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 FOXC2Q99958 501 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 CLEC4MQ9H2X3 399 aaPredicted RBP16.85■□□□□ 0.29
CLN6-204ENST00000564752 LIME1Q9H400 295 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 CALHM2Q9HA72 323 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 CCM2LQ9NUG4 571 aaPredicted RBP16.85■□□□□ 0.29
CLN6-204ENST00000564752 SLC17A7Q9P2U7 560 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 PTGDR2Q9Y5Y4 395 aa16.85■□□□□ 0.29
CLN6-204ENST00000564752 PRRC2AP48634 2157 aaKnown RBP16.84■□□□□ 0.29
CLN6-204ENST00000564752 VPS13CQ709C8 3753 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 MBD3L4A6NDZ8 208 aaPredicted RBP16.84■□□□□ 0.29
CLN6-204ENST00000564752 MBD3L3A6NE82 208 aaPredicted RBP16.84■□□□□ 0.29
CLN6-204ENST00000564752 FRG2CA6NGY1 282 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 MBD3L5A6NJ08 208 aaPredicted RBP16.84■□□□□ 0.29
CLN6-204ENST00000564752 SLC28A1O00337 649 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 RGS14O43566 566 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 ICOSLGO75144 302 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 NEFHP12036 1026 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 DRD5P21918 477 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 ALDH3A1P30838 453 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 MPIP34949 423 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 EMDP50402 254 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 SNTA1Q13424 505 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms