RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 NPY2RP49146 381 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 METAP1P53582 386 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 KRT83P78385 493 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 IL18R1Q13478 541 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 PDE7AQ13946 482 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 CDC37Q16543 378 aaPredicted RBP3.1□□□□□ -1.91
UBR1-205ENST00000564540 HIST2H2AA3Q6FI13 130 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 SNX32Q86XE0 403 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.1□□□□□ -1.91
UBR1-205ENST00000564540 CADM2Q8N3J6 435 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 LPCAT1Q8NF37 534 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 HIST1H2ACQ93077 130 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 DESI2Q9BSY9 194 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 SLC5A7Q9GZV3 580 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 IL1RAPL2Q9NP60 686 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 AKAP7Q9P0M2 348 aaPredicted RBP3.1□□□□□ -1.91
UBR1-205ENST00000564540 ENTPD4Q9Y227 616 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 SNX5Q9Y5X3 404 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 PTPRUQ92729 1446 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 PINLYPA6NC86 204 aa3.09□□□□□ -1.91
UBR1-205ENST00000564540 PTBP1P26599 531 aaKnown RBP eCLIP3.09□□□□□ -1.91
UBR1-205ENST00000564540 OAS2P29728 719 aaKnown RBP3.09□□□□□ -1.91
UBR1-205ENST00000564540 NSFP46459 744 aaKnown RBP3.09□□□□□ -1.91
UBR1-205ENST00000564540 NLRP11P59045 1033 aaKnown RBP3.09□□□□□ -1.91
UBR1-205ENST00000564540 PUDPQ08623 228 aa3.09□□□□□ -1.91
UBR1-205ENST00000564540 BNIP1Q12981 228 aa3.09□□□□□ -1.91
UBR1-205ENST00000564540 KYAT1Q16773 422 aa3.09□□□□□ -1.91
UBR1-205ENST00000564540 SLC10A5Q5PT55 438 aa3.09□□□□□ -1.91
UBR1-205ENST00000564540 LGSNQ5TDP6 509 aa3.09□□□□□ -1.91
UBR1-205ENST00000564540 TIFABQ6ZNK6 161 aa3.09□□□□□ -1.91
UBR1-205ENST00000564540 GET4Q7L5D6 327 aaPredicted RBP3.09□□□□□ -1.91
UBR1-205ENST00000564540 MOB1BQ7L9L4 216 aa3.09□□□□□ -1.91
UBR1-205ENST00000564540 BNIPLQ7Z465 357 aa3.09□□□□□ -1.91
UBR1-205ENST00000564540 C9orf40Q8IXQ3 194 aa3.09□□□□□ -1.91
UBR1-205ENST00000564540 CHCHD4Q8N4Q1 142 aa3.09□□□□□ -1.91
UBR1-205ENST00000564540 FAM104AQ969W3 186 aa3.09□□□□□ -1.91
UBR1-205ENST00000564540 DEFB118Q96PH6 123 aa3.09□□□□□ -1.91
UBR1-205ENST00000564540 ABCG4Q9H172 646 aa3.09□□□□□ -1.91
UBR1-205ENST00000564540 STARD5Q9NSY2 213 aa3.09□□□□□ -1.91
UBR1-205ENST00000564540 PDE10AQ9Y233 779 aa3.09□□□□□ -1.91
UBR1-205ENST00000564540 NPC1L1Q9UHC9 1359 aa3.09□□□□□ -1.92
UBR1-205ENST00000564540 GTF3C1Q12789 2109 aa3.08□□□□□ -1.92
UBR1-205ENST00000564540 LRRD1A4D1F6 860 aa3.08□□□□□ -1.92
UBR1-205ENST00000564540 IGKV3-11P04433 115 aa3.08□□□□□ -1.92
UBR1-205ENST00000564540 RPA1P27694 616 aa3.08□□□□□ -1.92
UBR1-205ENST00000564540 CTNNA1P35221 906 aaKnown RBP3.08□□□□□ -1.92
UBR1-205ENST00000564540 SGSHP51688 502 aa3.08□□□□□ -1.92
UBR1-205ENST00000564540 IL17AQ16552 155 aa3.08□□□□□ -1.92
UBR1-205ENST00000564540 ERI1Q8IV48 349 aaKnown RBP3.08□□□□□ -1.92
UBR1-205ENST00000564540 CNPY4Q8N129 248 aa3.08□□□□□ -1.92
UBR1-205ENST00000564540 TMEM37Q8WXS4 190 aa3.08□□□□□ -1.92
UBR1-205ENST00000564540 DLX4Q92988 240 aaPredicted RBP3.08□□□□□ -1.92
UBR1-205ENST00000564540 ATP6V1E2Q96A05 226 aa3.08□□□□□ -1.92
UBR1-205ENST00000564540 C5orf30Q96GV9 206 aa3.08□□□□□ -1.92
UBR1-205ENST00000564540 DHTKD1Q96HY7 919 aaPredicted RBP3.08□□□□□ -1.92
UBR1-205ENST00000564540 PLEKHF1Q96S99 279 aa3.08□□□□□ -1.92
UBR1-205ENST00000564540 MYOZ2Q9NPC6 264 aa3.08□□□□□ -1.92
UBR1-205ENST00000564540 MEPEQ9NQ76 525 aaPredicted RBP3.08□□□□□ -1.92
UBR1-205ENST00000564540 PIGVQ9NUD9 493 aa3.08□□□□□ -1.92
UBR1-205ENST00000564540 PURGQ9UJV8 347 aaKnown RBP3.08□□□□□ -1.92
UBR1-205ENST00000564540 BARX2Q9UMQ3 279 aaPredicted RBP3.08□□□□□ -1.92
UBR1-205ENST00000564540 NEU3Q9UQ49 428 aa3.08□□□□□ -1.92
UBR1-205ENST00000564540 NACAE9PAV3 2078 aa3.08□□□□□ -1.92
UBR1-205ENST00000564540 ARHGAP23Q9P227 1491 aa3.08□□□□□ -1.92
UBR1-205ENST00000564540 BICDL2A1A5D9 508 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 LRIT2A6NDA9 550 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 PDXKO00764 312 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 IGSF6O95976 241 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 PGK1P00558 417 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 GSTA1P08263 222 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 NR2C1P13056 603 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 FUT3P21217 361 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 UGT1A3P35503 534 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 EIF2B1Q14232 305 aaKnown RBP3.07□□□□□ -1.92
UBR1-205ENST00000564540 HERPUD1Q15011 391 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 PRR4Q16378 134 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 ZNF658BQ4V348 819 aaPredicted RBP3.07□□□□□ -1.92
UBR1-205ENST00000564540 PRAMEF7Q5VXH5 474 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 UFSP1Q6NVU6 142 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 CWC27Q6UX04 472 aaKnown RBP3.07□□□□□ -1.92
UBR1-205ENST00000564540 TFAP2EQ6VUC0 442 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 ZNF713Q8N859 430 aaPredicted RBP3.07□□□□□ -1.92
UBR1-205ENST00000564540 MLKLQ8NB16 471 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 ST7LQ8TDW4 575 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 EBF4Q9BQW3 602 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 FAM213AQ9BRX8 229 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 EHD1Q9H4M9 534 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 KCNMB3Q9NPA1 279 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 EXOSC3Q9NQT5 275 aaKnown RBP3.07□□□□□ -1.92
UBR1-205ENST00000564540 MIOXQ9UGB7 285 aa3.07□□□□□ -1.92
UBR1-205ENST00000564540 CCDC69A6NI79 296 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 OR7A17O14581 309 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 ARPC1BO15143 372 aaKnown RBP3.06□□□□□ -1.92
UBR1-205ENST00000564540 LRP3O75074 770 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 RTN2O75298 545 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 SYNGR4O95473 234 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 APRTP07741 180 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 ASNSP08243 561 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 H2AFZP0C0S5 128 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 ZNF853P0CG23 659 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms