RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	NLE1	Q9NVX2	485 aa	Predicted RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ACTL7A	Q9Y615	435 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	AIFM1	O95831	613 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	SLC35E2B	P0CK96	405 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	STK19	P49842	368 aa	Predicted RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	SNRPE	P62304	92 aa	Known RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	IRF9	Q00978	393 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	SAXO2	Q658L1	398 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	SHF	Q7M4L6	423 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	GALNT10	Q86SR1	603 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	LKAAEAR1	Q8TD35	194 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	CD180	Q99467	661 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	BRINP2	Q9C0B6	783 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	CDHR4	A6H8M9	788 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	CYB5A	P00167	134 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	OR1G1	P47890	313 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	RAB11B	Q15907	218 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	LFNG	Q8NES3	379 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	FER1L4	A9Z1Z3	1794 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	NRCAM	Q92823	1304 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288		J3KR12	359 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	SYT7	O43581	403 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	GPX5	O75715	221 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	SLC34A2	O95436	690 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	CRYBA1	P05813	215 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	NDUFA6	P56556	154 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ZNF628	Q5EBL2	1059 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ATAT1	Q5SQI0	421 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	TSSK4	Q6SA08	328 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	C15orf54	Q8N8G6	183 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	DNAAF1	Q8NEP3	725 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	AFDN	P55196	1824 aa	Known RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	PCGF2	P35227	344 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	BUD31	P41223	144 aa	Predicted RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	PCP4	P48539	62 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	OR1J2	Q8NGS2	313 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	OR1J1	Q8NGS3	322 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ZBED6CL	Q96FA7	236 aa	Predicted RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	PGAP3	Q96FM1	320 aa	Predicted RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	AMBRA1	Q9C0C7	1298 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	PTPRH	Q9HD43	1115 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	KPTN	Q9Y664	436 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	TRIM77	I1YAP6	450 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	SSX4	O60224	188 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	HTR4	Q13639	388 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	PROKR1	Q8TCW9	393 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	RAB39B	Q96DA2	213 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	COMMD4	Q9H0A8	199 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	CERS4	Q9HA82	394 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	MRTO4	Q9UKD2	239 aa	Known RBP	4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	ENPP3	O14638	875 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	ZNF35	P13682	527 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	ZNF8	P17098	575 aa	Predicted RBP	4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	GGT5	P36269	586 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	SLC7A9	P82251	487 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	FBXO48	Q5FWF7	155 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	ZNF467	Q7Z7K2	595 aa	Predicted RBP	4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	LINGO1	Q96FE5	620 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	BHLHE40	O14503	412 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	ALDOC	P09972	364 aa	Known RBP	4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	TXN	P10599	105 aa	Known RBP	4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	CPE	P16870	476 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	KCNC1	P48547	511 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	MAPK14	Q16539	360 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	ETV3L	Q6ZN32	361 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	VTCN1	Q7Z7D3	282 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	OSMR	Q99650	979 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	BTG4	Q9NY30	223 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	ABCA1	O95477	2261 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	GXYLT2	A0PJZ3	443 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	OR6A2	O95222	327 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	SPN	P16150	400 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	LUM	P51884	338 aa	Predicted RBP	4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	SCARB2	Q14108	478 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	APOOL	Q6UXV4	268 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	HORMAD2	Q8N7B1	307 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	OR56B1	Q8NGI3	324 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	OVCA2	Q8WZ82	227 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	OR2AG1	Q9H205	316 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	TMEM210	A6NLX4	147 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	FAHD1	Q6P587	224 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	TMEM200A	Q86VY9	491 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288		J3QR89	54 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	NXNL2	Q5VZ03	156 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	CLEC14A	Q86T13	490 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	LUZP4	Q9P127	313 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	MAFB	Q9Y5Q3	323 aa	Predicted RBP	4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	TMEM14A	Q9Y6G1	99 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	COL22A1	Q8NFW1	1626 aa	Predicted RBP	4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	ZNF541	Q9H0D2	1346 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	NCR1	O76036	304 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	ASGR2	P07307	311 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	TAGLN2	P37802	199 aa	Known RBP	4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	RPL38	P63173	70 aa	Known RBP	4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	CXADR	P78310	365 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	PTPRR	Q15256	657 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	DNM1P34	Q6PK57	102 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms