RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 ANKRD26P1Q6NSI1 321 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 SLC30A6Q6NXT4 461 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 TMEM81Q6P7N7 255 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 Q6ZSR9 355 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 GDF7Q7Z4P5 450 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 SLC44A2Q8IWA5 706 aaPredicted RBP18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 ULK2Q8IYT8 1036 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 OR4N2Q8NGD1 307 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 OR1J4Q8NGS1 313 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 STMN4Q9H169 189 aaPredicted RBP18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 GLIPR2Q9H4G4 154 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 TAS2R7Q9NYW3 318 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 MAPRE3Q9UPY8 281 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 FBN2P35556 2912 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 LRBAP50851 2863 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 A0A0G2JNJ9 132 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 OR6C70A6NIJ9 312 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 COQ9O75208 318 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 CHEK2O96017 543 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 SDC1P18827 310 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 ELAVL4P26378 380 aaKnown RBP18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 RPL38P63173 70 aaKnown RBP18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 WIPI1Q5MNZ9 446 aaPredicted RBP18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 RNF165Q6ZSG1 346 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 LARP4Q71RC2 724 aaKnown RBP eCLIP18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 DDIASQ8IXT1 998 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 ZNF295-AS1Q8N0V1 137 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 CLHC1Q8NHS4 586 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 AGR3Q8TD06 166 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 TWIST2Q8WVJ9 160 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 SLC35A4Q96G79 324 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 METTL2AQ96IZ6 378 aaKnown RBP18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 FCRL1Q96LA6 429 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 AMDHD1Q96NU7 426 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 ADOQ96SZ5 270 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 CCT7Q99832 543 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 SERHLQ9NQF3 203 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 NPDC1Q9NQX5 325 aaPredicted RBP18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 TAS2R9Q9NYW1 312 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 Q9UFV3 132 aa18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 WBP11Q9Y2W2 641 aaKnown RBP18.23■□□□□ 0.51
SHCBP1-203ENST00000564272 APCP25054 2843 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 A0A087WV62 115 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 KDM4EB2RXH2 506 aaPredicted RBP18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 UPK1AO00322 258 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 LSM1O15116 133 aaKnown RBP18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 AKAP10O43572 662 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 TSPAN2O60636 221 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 TOXO94900 526 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 GABRA1P14867 456 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 IL12BP29460 328 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 ARRB2P32121 409 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 TFF3Q07654 80 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 SNTA1Q13424 505 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 GALNTL6Q49A17 601 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 DCST1Q5T197 706 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 MEX3BQ6ZN04 569 aaKnown RBP18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 WDR53Q7Z5U6 358 aaPredicted RBP18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 MREGQ8N565 214 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 ACBD4Q8NC06 268 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 FAM83FQ8NEG4 500 aaPredicted RBP18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 CIDECQ96AQ7 238 aaPredicted RBP18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 EFHD2Q96C19 240 aaPredicted RBP18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 TMCO6Q96DC7 493 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 TSSK3Q96PN8 268 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 TIMP4Q99727 224 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 PARD6BQ9BYG5 372 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 DDX18Q9NVP1 670 aaKnown RBP18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 GIMAP2Q9UG22 337 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 C19orf53Q9UNZ5 99 aaPredicted RBP18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 OR10H1Q9Y4A9 318 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 TRAF6Q9Y4K3 522 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 HCFC1P51610 2035 aa18.22■□□□□ 0.51
SHCBP1-203ENST00000564272 CREBBPQ92793 2442 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 ARHGAP21Q5T5U3 1957 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 PIP5K1BO14986 540 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 ABCB7O75027 752 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 SLITRK5O94991 958 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 KRT20P35900 424 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 WNT3P56703 355 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 PSG6Q00889 435 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 ZNF844Q08AG5 666 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 HSPB3Q12988 150 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 UGT3A2Q3SY77 523 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 ACSF3Q4G176 576 aaPredicted RBP18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 RFTN2Q52LD8 501 aaPredicted RBP18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 ZNF385BQ569K4 471 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 SH2D4BQ5SQS7 431 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 SEM1Q6ZVN7 128 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 ZNF551Q7Z340 670 aaPredicted RBP18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 YRDCQ86U90 279 aaKnown RBP18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 LURAP1LQ8IV03 231 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 OR2L13Q8N349 312 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 WDSUB1Q8N9V3 476 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 ELP4Q96EB1 424 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 SPOCK3Q9BQ16 436 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 TMEM109Q9BVC6 243 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 UGT2B28Q9BY64 529 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 ENKD1Q9H0I2 346 aa18.21■□□□□ 0.51
SHCBP1-203ENST00000564272 EML4Q9HC35 981 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms