RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ENPP4Q9Y6X5 453 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 KMT2EQ8IZD2 1858 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 IGKV3D-11A0A0A0MRZ8 115 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 FLRT2O43155 660 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 MERTKQ12866 999 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 MINDY4Q4G0A6 757 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 MFSD4BQ5TF39 518 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 FOXB2Q5VYV0 432 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 LAIR1Q6GTX8 287 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 QSOX2Q6ZRP7 698 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 COX15Q7KZN9 410 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 RBM45Q8IUH3 476 aaKnown RBP16.8■□□□□ 0.28
COMMD4-208ENST00000563220 LACC1Q8IV20 430 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 CNBD2Q96M20 576 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 STACQ99469 402 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 SDF2Q99470 211 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 ADI1Q9BV57 179 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 SPATA5L1Q9BVQ7 753 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 SLC7A5P2Q9GIP4 190 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 RXFP3Q9NSD7 469 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 USE1Q9NZ43 259 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 FTSJ1Q9UET6 329 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 MKLN1Q9UL63 735 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 GDF9O60383 454 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 COQ9O75208 318 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 SEMA7AO75326 666 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 IFNW1P05000 195 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 ITGA2P17301 1181 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 GABRA3P34903 492 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 PGDP52209 483 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 RHAGQ02094 409 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 FUT7Q11130 342 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 BIKQ13323 160 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 TYW3Q6IPR3 259 aaKnown RBP16.8■□□□□ 0.28
COMMD4-208ENST00000563220 UGT2A3Q6UWM9 527 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 LAPTM4BQ86VI4 370 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 CARM1Q86X55 608 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 CHERPQ8IWX8 916 aaKnown RBP16.8■□□□□ 0.28
COMMD4-208ENST00000563220 PRSS58Q8IYP2 241 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 CHDHQ8NE62 594 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-208ENST00000563220 GPR151Q8TDV0 419 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 RBM4BQ9BQ04 359 aaKnown RBP16.8■□□□□ 0.28
COMMD4-208ENST00000563220 CNPPD1Q9BV87 410 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 RBM4Q9BWF3 364 aaKnown RBP16.8■□□□□ 0.28
COMMD4-208ENST00000563220 SOX17Q9H6I2 414 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-208ENST00000563220 FOLH1BQ9HBA9 442 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 FBXO34Q9NWN3 711 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 IFT80Q9P2H3 777 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-208ENST00000563220 ERVK-19Q9WJR5 959 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 PCDHGB3Q9Y5G1 929 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 LYVE1Q9Y5Y7 322 aa16.8■□□□□ 0.28
COMMD4-208ENST00000563220 GXYLT2A0PJZ3 443 aa16.79■□□□□ 0.28
COMMD4-208ENST00000563220 SCRG1O75711 98 aa16.79■□□□□ 0.28
COMMD4-208ENST00000563220 DNAJB5O75953 348 aa16.79■□□□□ 0.28
COMMD4-208ENST00000563220 HPRP00739 348 aa16.79■□□□□ 0.28
COMMD4-208ENST00000563220 GP1BAP07359 652 aa16.79■□□□□ 0.28
COMMD4-208ENST00000563220 PABPC4LP0CB38 370 aaKnown RBP16.79■□□□□ 0.28
COMMD4-208ENST00000563220 CD59P13987 128 aa16.79■□□□□ 0.28
COMMD4-208ENST00000563220 TNNI3P19429 210 aa16.79■□□□□ 0.28
COMMD4-208ENST00000563220 GALNSP34059 522 aa16.79■□□□□ 0.28
COMMD4-208ENST00000563220 CHN2P52757 468 aa16.79■□□□□ 0.28
COMMD4-208ENST00000563220 PSG6Q00889 435 aa16.79■□□□□ 0.28
COMMD4-208ENST00000563220 ZNF155Q12901 538 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-208ENST00000563220 ZIK1Q3SY52 487 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-208ENST00000563220 SLC36A3Q495N2 470 aa16.79■□□□□ 0.28
COMMD4-208ENST00000563220 ZNF605Q86T29 641 aa16.79■□□□□ 0.28
COMMD4-208ENST00000563220 VRK2Q86Y07 508 aa16.79■□□□□ 0.28
COMMD4-208ENST00000563220 VANGL1Q8TAA9 524 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-208ENST00000563220 PTPMT1Q8WUK0 201 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-208ENST00000563220 NRBF2Q96F24 287 aa16.79■□□□□ 0.28
COMMD4-208ENST00000563220 EPYCQ99645 322 aa16.79■□□□□ 0.28
COMMD4-208ENST00000563220 PNO1Q9NRX1 252 aaKnown RBP16.79■□□□□ 0.28
COMMD4-208ENST00000563220 PDP1Q9P0J1 537 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-208ENST00000563220 CTSFQ9UBX1 484 aa16.79■□□□□ 0.28
COMMD4-208ENST00000563220 DTX4Q9Y2E6 619 aa16.79■□□□□ 0.28
COMMD4-208ENST00000563220 CHST2Q9Y4C5 530 aa16.79■□□□□ 0.28
COMMD4-208ENST00000563220 HEMK1Q9Y5R4 338 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-208ENST00000563220 EFCAB7A8K855 629 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 TNFRSF11BO00300 401 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 FFAR1O14842 300 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 ADAMDEC1O15204 470 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 NKX2-2O95096 273 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 LGI1O95970 557 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 CLPSP04118 112 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 ALPPP05187 535 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 ZNF806P0C7X5 589 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 THRBP10828 461 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 RHCEP18577 417 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 CSTF2P33240 577 aaKnown RBP eCLIP16.78■□□□□ 0.28
COMMD4-208ENST00000563220 ARHGDIAP52565 204 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 ZNF311Q5JNZ3 666 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 DCST2Q5T1A1 773 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 TCTN3Q6NUS6 607 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 PPP1R3BQ86XI6 285 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 COX18Q8N8Q8 333 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 OR4C15Q8NGM1 316 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 OR52J3Q8NH60 311 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 VSTM2LQ96N03 204 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 PIP5K1AQ99755 562 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 CTRCQ99895 268 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms