RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SOX30O94993 753 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 HMGN2P05204 90 aaKnown RBP12.34□□□□□ -0.43
CDH1-204ENST00000562118 GUSBP08236 651 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 VIMP08670 466 aaKnown RBP12.34□□□□□ -0.43
CDH1-204ENST00000562118 CCL3P10147 92 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 ACP2P11117 423 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 LSP1P33241 339 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 PIGAP37287 484 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 PTGDSP41222 190 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 MAGEA8P43361 318 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 CCT3P49368 545 aaKnown RBP12.34□□□□□ -0.43
CDH1-204ENST00000562118 ST13P50502 369 aaKnown RBP12.34□□□□□ -0.43
CDH1-204ENST00000562118 TDGF1P3P51864 188 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 PNLIPRP2P54317 469 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 NME5P56597 212 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 OC90Q02509 493 aaPredicted RBP12.34□□□□□ -0.43
CDH1-204ENST00000562118 FOXO1Q12778 655 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 ZNF155Q12901 538 aaPredicted RBP12.34□□□□□ -0.43
CDH1-204ENST00000562118 SNTA1Q13424 505 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 MAPKAPK3Q16644 382 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 PRR30Q53SZ7 412 aaPredicted RBP12.34□□□□□ -0.43
CDH1-204ENST00000562118 HLA-DQA1Q5Y7H0 255 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 SAXO2Q658L1 398 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 CDC73Q6P1J9 531 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 IL20RBQ6UXL0 311 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 GALNTL5Q7Z4T8 443 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 SIAH3Q8IW03 269 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 POGLUT1Q8NBL1 392 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 VPS37AQ8NEZ2 397 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 OR10G3Q8NGC4 313 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 TSPEARQ8WU66 669 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 OMA1Q96E52 524 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 NEURL3Q96EH8 262 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 C5orf34Q96MH7 638 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 OR52E6Q96RD3 313 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 ZBTB18Q99592 522 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 SERHL2Q9H4I8 314 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 RABEP2Q9H5N1 569 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 ZCCHC3Q9NUD5 404 aaKnown RBP12.34□□□□□ -0.43
CDH1-204ENST00000562118 MRGBPQ9NV56 204 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 CNIH4Q9P003 139 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 TRIM33Q9UPN9 1127 aa12.34□□□□□ -0.43
CDH1-204ENST00000562118 GCN1Q92616 2671 aaKnown RBP12.33□□□□□ -0.44
CDH1-204ENST00000562118 TRBV5-3A0A0A0MS03 114 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 C9JVG2 144 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 UGT2B11O75310 529 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 TRIM3O75382 744 aaPredicted RBP12.33□□□□□ -0.44
CDH1-204ENST00000562118 IL33O95760 270 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 CD1EP15812 388 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 CAPN3P20807 821 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 DRD4P21917 467 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 UQCRC2P22695 453 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 LCN1P31025 176 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 CDKN2CP42773 168 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 FBXW4P57775 412 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 TXNL4AP83876 142 aaKnown RBP12.33□□□□□ -0.44
CDH1-204ENST00000562118 INPP5JQ15735 1006 aaPredicted RBP12.33□□□□□ -0.44
CDH1-204ENST00000562118 DUSP5Q16690 384 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.33□□□□□ -0.44
CDH1-204ENST00000562118 VPS26BQ4G0F5 336 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 TBCELQ5QJ74 424 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 LRIF1Q5T3J3 769 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 BHLHB9Q6PI77 547 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 NUP54Q7Z3B4 507 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 ANKRD46Q86W74 232 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 SULF2Q8IWU5 870 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 SLC16A11Q8NCK7 471 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 OR4N2Q8NGD1 307 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 GTF2H4Q92759 462 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 DIO2Q92813 273 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 TMBIM1Q969X1 311 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 TMEM125Q96AQ2 219 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 THOC1Q96FV9 657 aaKnown RBP12.33□□□□□ -0.44
CDH1-204ENST00000562118 ANGPTL4Q9BY76 406 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 ACTRT3Q9BYD9 372 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 PIGUQ9H490 435 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 CBLCQ9ULV8 474 aa12.33□□□□□ -0.44
CDH1-204ENST00000562118 POLEQ07864 2286 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 NBASA2RRP1 2371 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 A0A0G2JMM0 328 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 RNF103-CHMP3A0A140T963 221 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 A0A1W2PPB8 328 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 A0A1W2PRS3 328 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 KIR3DP1A8MWS1 328 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 ASNA1O43681 348 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 RASAL1O95294 804 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 NGFRP08138 427 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 KRT16P08779 473 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 CNR1P21554 472 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 ADSLP30566 484 aaPredicted RBP12.32□□□□□ -0.44
CDH1-204ENST00000562118 CASP3P42574 277 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 TRPC1P48995 793 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 PRIM2P49643 509 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 ARFIP2P53365 341 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 MVDP53602 400 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 GAS1P54826 345 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 STX1BP61266 288 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 FOXK1P85037 733 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 PLCXD2Q0VAA5 305 aa12.32□□□□□ -0.44
CDH1-204ENST00000562118 LASP1Q14847 261 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms