RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 PHF3Q92576 2039 aaKnown RBP8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 A0A0G2JNJ9 132 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 GXYLT2A0PJZ3 443 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 SERTM1A2A2V5 107 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 FRG2CA6NGY1 282 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 FIGNL2A6NMB9 653 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 ESPNB1AK53 854 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 BCKDKO14874 412 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 RGS16O15492 202 aaPredicted RBP8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 ITM2AO43736 263 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 CHEK2O96017 543 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 CYP4B1P13584 511 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 SDC1P18827 310 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 DRD5P21918 477 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 PTPN6P29350 595 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 IL12BP29460 328 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 MPIP34949 423 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 GPC1P35052 558 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 KRT20P35900 424 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 STARP49675 285 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 CDK9P50750 372 aaKnown RBP8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 RNF144AP50876 292 aaPredicted RBP8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 AGFG1P52594 562 aaKnown RBP8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 RPP38P78345 283 aaKnown RBP8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 SRYQ05066 204 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 ZNF844Q08AG5 666 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 TBCELQ5QJ74 424 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 CEP85LQ5SZL2 805 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 CES4AQ5XG92 561 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 TIGD3Q6B0B8 471 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 WDR93Q6P2C0 686 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 B3GNT6Q6ZMB0 384 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 LARP4Q71RC2 724 aaKnown RBP eCLIP8.65□□□□□ -1.027e-11■■■■□ 21.9
NSMCE1-203ENST00000562039 NUP54Q7Z3B4 507 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 EXOC3L1Q86VI1 746 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 DND1Q8IYX4 353 aaKnown RBP8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 EID3Q8N140 333 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 FAM83FQ8NEG4 500 aaPredicted RBP8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 OR1J4Q8NGS1 313 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 PPP1R14CQ8TAE6 165 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 NEIL3Q8TAT5 605 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 PIK3R3Q92569 461 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 HSPBAP1Q96EW2 488 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 C3orf30Q96M34 536 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 AMDHD1Q96NU7 426 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 COL21A1Q96P44 957 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 TTYH2Q9BSA4 534 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 YIPF4Q9BSR8 244 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 ROPN1BQ9BZX4 212 aaPredicted RBP8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 ROPN1Q9HAT0 212 aaPredicted RBP8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 DDX18Q9NVP1 670 aaKnown RBP8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 MKS1Q9NXB0 559 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 Q9UFV3 132 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 ZDHHC2Q9UIJ5 367 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 FBXL2Q9UKC9 423 aa8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 RPH3AQ9Y2J0 694 aaPredicted RBP8.65□□□□□ -1.02
NSMCE1-203ENST00000562039 ANKRD33BA6NCL7 494 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 UPK1AO00322 258 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 SNPHO15079 494 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 LSM1O15116 133 aaKnown RBP8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 ACOX3O15254 700 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 PDPK1O15530 556 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 CTIFO43310 598 aaKnown RBP8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 TYROBPO43914 113 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 SUSD5O60279 629 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 NPHS1O60500 1241 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 TSPAN2O60636 221 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 HCN1O60741 890 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 SNX4O95219 450 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 BPGMP07738 259 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 BMP7P18075 431 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 GABRA3P34903 492 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 KRTAP10-9P60411 292 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 DCAF7P61962 342 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 CRYZQ08257 329 aaKnown RBP8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 GAB1Q13480 694 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 UGT3A2Q3SY77 523 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 SEM1Q6ZVN7 128 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 NUDCD3Q8IVD9 361 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 ULK2Q8IYT8 1036 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 ZNF295-AS1Q8N0V1 137 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 CLYBLQ8N0X4 340 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 ANKRD42Q8N9B4 389 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 WDSUB1Q8N9V3 476 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 C17orf47Q8NEP4 570 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 TNIP2Q8NFZ5 429 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 OR7A2PQ8NGA2 310 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 OR5M1Q8NGP8 315 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 OR14L1PQ8NHC6 308 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 PPCDCQ96CD2 204 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 TMEM41AQ96HV5 264 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 ZIM3Q96PE6 472 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 TRIB1Q96RU8 372 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 TIMP4Q99727 224 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 PAIP2Q9BPZ3 127 aaKnown RBP8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 UGT2B28Q9BY64 529 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 RTN4RQ9BZR6 473 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 REEP4Q9H6H4 257 aa8.64□□□□□ -1.03
NSMCE1-203ENST00000562039 KCNK9Q9NPC2 374 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms