RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 NHSL2Q5HYW2 709 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 DCST1Q5T197 706 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 CLEC2AQ6UVW9 174 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 FAM47EQ6ZV65 393 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 USP43Q70EL4 1123 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 MON1BQ7L1V2 547 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 ZNF677Q86XU0 584 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 PM20D2Q8IYS1 436 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 ZNF525Q8N782 197 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 SPATA22Q8NHS9 363 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 ZPLD1Q8TCW7 415 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 C10orf105Q8TEF2 133 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 MRPL24Q96A35 216 aaKnown RBP3.34□□□□□ -1.87
HERC1-211ENST00000560983 DCUN1D1Q96GG9 259 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 SGCZQ96LD1 299 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 HS6ST2Q96MM7 605 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 RASL10BQ96S79 203 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 DPH7Q9BTV6 452 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 TRAF4Q9BUZ4 470 aaPredicted RBP3.34□□□□□ -1.87
HERC1-211ENST00000560983 RBM4Q9BWF3 364 aaKnown RBP3.34□□□□□ -1.87
HERC1-211ENST00000560983 MS4A7Q9GZW8 240 aaPredicted RBP3.34□□□□□ -1.87
HERC1-211ENST00000560983 ZMAT3Q9HA38 289 aaKnown RBP3.34□□□□□ -1.87
HERC1-211ENST00000560983 HPF1Q9NWY4 346 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 ARL15Q9NXU5 204 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 HCN3Q9P1Z3 774 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 HEY2Q9UBP5 337 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 FBXW2Q9UKT8 454 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 PPIEQ9UNP9 301 aaKnown RBP3.34□□□□□ -1.87
HERC1-211ENST00000560983 PRSS21Q9Y6M0 314 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 TENM2Q9NT68 2774 aa3.34□□□□□ -1.88
HERC1-211ENST00000560983 IGKV2D-30A0A075B6S6 120 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 IGKV3D-11A0A0A0MRZ8 115 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 IGHV4-61A0A0C4DH41 118 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 A0A1W2PNV4 684 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 KRT87PA6NCN2 255 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 A8MUA0 341 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 TMEM233B4DJY2 109 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 PRR23D1E9PI22 279 aaPredicted RBP3.33□□□□□ -1.88
HERC1-211ENST00000560983 TRIM77I1YAP6 450 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 KCNK1O00180 336 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 CDC7O00311 574 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 LIN7AO14910 233 aaPredicted RBP3.33□□□□□ -1.88
HERC1-211ENST00000560983 CD3EAPO15446 510 aaKnown RBP3.33□□□□□ -1.88
HERC1-211ENST00000560983 CGAP01215 116 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 C1QAP02745 245 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 CD48P09326 243 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 PRR23D2P0DMB1 279 aaPredicted RBP3.33□□□□□ -1.88
HERC1-211ENST00000560983 RALBP11234 206 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 PSMA2P25787 234 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 FMO4P31512 558 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 SERPINB6P35237 376 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 CCR8P51685 355 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 PRKAG1P54619 331 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 DIO3P55073 304 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 EEF1A1P68104 462 aaKnown RBP3.33□□□□□ -1.88
HERC1-211ENST00000560983 BTG2P78543 158 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 IFI35P80217 286 aaPredicted RBP3.33□□□□□ -1.88
HERC1-211ENST00000560983 RELAQ04206 551 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 MSLNQ13421 630 aaPredicted RBP3.33□□□□□ -1.88
HERC1-211ENST00000560983 GAB1Q13480 694 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 BRD3Q15059 726 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 PAFAH1B3Q15102 231 aaKnown RBP3.33□□□□□ -1.88
HERC1-211ENST00000560983 CCSMST1Q4G0I0 132 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 SIRPB2Q5JXA9 342 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 EEF1A1P5Q5VTE0 462 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 KLHDC7AQ5VTJ3 777 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 NCBP2-AS2Q69YL0 99 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 DNAJC24Q6P3W2 148 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 ZNF449Q6P9G9 518 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 DCUN1D2Q6PH85 259 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 RTL4Q6ZR62 310 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 KIAA1328Q86T90 577 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 GCNT2Q8N0V5 402 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 SNX31Q8N9S9 440 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 B3GNT7Q8NFL0 401 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 OR5T3Q8NGG3 340 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 HMGCLL1Q8TB92 370 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 HTRA1Q92743 480 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 LYZL4Q96KX0 146 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 ZFP3Q96NJ6 502 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 FAM111AQ96PZ2 611 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 COPS8Q99627 209 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 TUBA1CQ9BQE3 449 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 FICDQ9BVA6 458 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 UGT2B28Q9BY64 529 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 STK33Q9BYT3 514 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 SLC25A51Q9H1U9 297 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 OPN3Q9H1Y3 402 aaPredicted RBP3.33□□□□□ -1.88
HERC1-211ENST00000560983 METTL17Q9H7H0 456 aaPredicted RBP3.33□□□□□ -1.88
HERC1-211ENST00000560983 ESM1Q9NQ30 184 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 SACM1LQ9NTJ5 587 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 QPCTLQ9NXS2 382 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 IP6K2Q9UHH9 426 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 CAMK2AQ9UQM7 478 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 SLC6A5Q9Y345 797 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 PKP3Q9Y446 797 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 PTGDR2Q9Y5Y4 395 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 ARL5AQ9Y689 179 aa3.33□□□□□ -1.88
HERC1-211ENST00000560983 ANKRD62A6NC57 917 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 FAM90A8PA6NJQ4 464 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms