RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 METTL17Q9H7H0 456 aaPredicted RBP15.54■□□□□ 0.08
TPM1-228ENST00000560975 SLAMF7Q9NQ25 335 aa15.54■□□□□ 0.08
TPM1-228ENST00000560975 IL20RAQ9UHF4 553 aa15.54■□□□□ 0.08
TPM1-228ENST00000560975 TMEM5Q9Y2B1 443 aa15.54■□□□□ 0.08
TPM1-228ENST00000560975 FKBP7Q9Y680 259 aa15.54■□□□□ 0.08
TPM1-228ENST00000560975 POM121CA8CG34 1229 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 SYN3O14994 580 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 KHNYNO15037 678 aaKnown RBP15.53■□□□□ 0.08
TPM1-228ENST00000560975 SEPT4O43236 478 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 RGS11O94810 467 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 EFNB1P98172 346 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 SYPL1Q16563 259 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 SIAH3Q8IW03 269 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.53■□□□□ 0.08
TPM1-228ENST00000560975 C11orf49Q9H6J7 331 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 KCNK12Q9HB15 430 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 SDHAF2Q9NX18 166 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 CNIH4Q9P003 139 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 NUBP2Q9Y5Y2 271 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 KIAA1671Q9BY89 1806 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 IGLV3-16A0A075B6K0 115 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 hCG_1807616A0A1W2PRN6 198 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 LGALS8O00214 317 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 ADAM12O43184 909 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 ACSL1P33121 698 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 SELENOPP49908 381 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 MANFP55145 182 aaKnown RBP15.53■□□□□ 0.08
TPM1-228ENST00000560975 IKZF1Q13422 519 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 EOGTQ5NDL2 527 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 SLC25A30Q5SVS4 291 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 RETSATQ6NUM9 610 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 SLC27A4Q6P1M0 643 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 LRRC28Q86X40 367 aaPredicted RBP15.53■□□□□ 0.08
TPM1-228ENST00000560975 SDR16C5Q8N3Y7 309 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 TOMM5Q8N4H5 51 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 KLHL36Q8N4N3 616 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 ZNF527Q8NB42 609 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 ZNF740Q8NDX6 193 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 BBS1Q8NFJ9 593 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 ADAMTS19Q8TE59 1207 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 CHFRQ96EP1 664 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 ALG14Q96F25 216 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 TBX5Q99593 518 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 FUZQ9BT04 418 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 ISG20L2Q9H9L3 353 aaKnown RBP15.53■□□□□ 0.08
TPM1-228ENST00000560975 OR6C2Q9NZP2 312 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 DOCK6Q96HP0 2047 aa15.53■□□□□ 0.08
TPM1-228ENST00000560975 MEIKINA0A087WXM9 373 aa15.52■□□□□ 0.08
TPM1-228ENST00000560975 MT-ND4P03905 459 aa15.52■□□□□ 0.08
TPM1-228ENST00000560975 IFNA16P05015 189 aa15.52■□□□□ 0.08
TPM1-228ENST00000560975 SRPRAP08240 638 aaKnown RBP15.52■□□□□ 0.08
TPM1-228ENST00000560975 XPAP23025 273 aaPredicted RBP15.52■□□□□ 0.08
TPM1-228ENST00000560975 NUP62P37198 522 aaPredicted RBP15.52■□□□□ 0.08
TPM1-228ENST00000560975 SMIM11AP58511 58 aa15.52■□□□□ 0.08
TPM1-228ENST00000560975 SLC36A2Q495M3 483 aa15.52■□□□□ 0.08
TPM1-228ENST00000560975 MARC2Q969Z3 335 aa15.52■□□□□ 0.08
TPM1-228ENST00000560975 SMG9Q9H0W8 520 aaKnown RBP15.52■□□□□ 0.08
TPM1-228ENST00000560975 MCCC2Q9HCC0 563 aa15.52■□□□□ 0.08
TPM1-228ENST00000560975 DMRT3Q9NQL9 472 aa15.52■□□□□ 0.08
TPM1-228ENST00000560975 KCNMB2Q9Y691 235 aa15.52■□□□□ 0.08
TPM1-228ENST00000560975 PLXNB3Q9ULL4 1909 aa15.52■□□□□ 0.07
TPM1-228ENST00000560975 IGSF6O95976 241 aa15.52■□□□□ 0.07
TPM1-228ENST00000560975 HPXP02790 462 aa15.52■□□□□ 0.07
TPM1-228ENST00000560975 H2AFB2P0C5Z0 115 aa15.52■□□□□ 0.07
TPM1-228ENST00000560975 PTNP21246 168 aa15.52■□□□□ 0.07
TPM1-228ENST00000560975 KELP23276 732 aa15.52■□□□□ 0.07
TPM1-228ENST00000560975 CCND3P30281 292 aaPredicted RBP15.52■□□□□ 0.07
TPM1-228ENST00000560975 TSPAN5P62079 268 aa15.52■□□□□ 0.07
TPM1-228ENST00000560975 FAM110CQ1W6H9 321 aa15.52■□□□□ 0.07
TPM1-228ENST00000560975 SLC30A6Q6NXT4 461 aa15.52■□□□□ 0.07
TPM1-228ENST00000560975 C6orf120Q7Z4R8 191 aa15.52■□□□□ 0.07
TPM1-228ENST00000560975 DCAF4L2Q8NA75 395 aa15.52■□□□□ 0.07
TPM1-228ENST00000560975 FBXO15Q8NCQ5 510 aaPredicted RBP15.52■□□□□ 0.07
TPM1-228ENST00000560975 OR5D16Q8NGK9 328 aa15.52■□□□□ 0.07
TPM1-228ENST00000560975 XAGE5Q8WWM1 108 aa15.52■□□□□ 0.07
TPM1-228ENST00000560975 MYNNQ9NPC7 610 aa15.52■□□□□ 0.07
TPM1-228ENST00000560975 MAN2C1Q9NTJ4 1040 aa15.52■□□□□ 0.07
TPM1-228ENST00000560975 PTTG3PQ9NZH4 202 aa15.52■□□□□ 0.07
TPM1-228ENST00000560975 CLEC4EQ9ULY5 219 aa15.52■□□□□ 0.07
TPM1-228ENST00000560975 IRGMA1A4Y4 181 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 RTCAO00442 366 aaKnown RBP15.51■□□□□ 0.07
TPM1-228ENST00000560975 B4GALT2O60909 372 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 GJA1P17302 382 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 CFL1P23528 166 aaKnown RBP15.51■□□□□ 0.07
TPM1-228ENST00000560975 LCN1P31025 176 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 ZP1P60852 638 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 SMAD3P84022 425 aaKnown RBP15.51■□□□□ 0.07
TPM1-228ENST00000560975 GSG1Q2KHT4 349 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 TAS1R1Q7RTX1 841 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 OR6T1Q8NGN1 323 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 PIGKQ92643 395 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 HGDQ93099 445 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 SCRN2Q96FV2 425 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 CXorf58Q96LI9 332 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 FCRL4Q96PJ5 515 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 DDOQ99489 341 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 C2orf49Q9BVC5 232 aaPredicted RBP15.51■□□□□ 0.07
TPM1-228ENST00000560975 MRPS18AQ9NVS2 196 aaKnown RBP15.51■□□□□ 0.07
TPM1-228ENST00000560975 SIRT4Q9Y6E7 314 aaPredicted RBP15.51■□□□□ 0.07
TPM1-228ENST00000560975 GOLGA4Q13439 2230 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms