RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 KRT72Q14CN4 511 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 ZNHIT3Q15649 155 aaPredicted RBP11.17□□□□□ -0.62
IRF9-211ENST00000560852 LACTB2Q53H82 288 aaPredicted RBP11.17□□□□□ -0.62
IRF9-211ENST00000560852 RUNDC3AQ59EK9 446 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 C8orf82Q6P1X6 216 aaPredicted RBP11.17□□□□□ -0.62
IRF9-211ENST00000560852 SLC2A7Q6PXP3 512 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 ZNF621Q6ZSS3 439 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 TREML1Q86YW5 311 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 MSRB3Q8IXL7 192 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 SLC34A3Q8N130 599 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 ZADH2Q8N4Q0 377 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 METTL25Q8N6Q8 603 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 RBMXL3Q8N7X1 1067 aaKnown RBP11.17□□□□□ -0.62
IRF9-211ENST00000560852 OR52N2Q8NGI0 321 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 BCAS4Q8TDM0 211 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 DOK4Q8TEW6 326 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 SPACA9Q96E40 222 aaPredicted RBP11.17□□□□□ -0.62
IRF9-211ENST00000560852 FRMD6Q96NE9 622 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 ARHGAP9Q9BRR9 750 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 UTP23Q9BRU9 249 aaKnown RBP11.17□□□□□ -0.62
IRF9-211ENST00000560852 SLC35A5Q9BS91 424 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 BTBD2Q9BX70 525 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 FAM107BQ9H098 131 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 SAP130Q9H0E3 1048 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 TPT1P8Q9HAU6 139 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 Q9N2J8 555 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 CNIH4Q9P003 139 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 SLAMF8Q9P0V8 285 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 MRTO4Q9UKD2 239 aaKnown RBP11.17□□□□□ -0.62
IRF9-211ENST00000560852 LHX6Q9UPM6 363 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 SCN2AQ99250 2005 aa11.17□□□□□ -0.62
IRF9-211ENST00000560852 KMT2BQ9UMN6 2715 aaPredicted RBP11.17□□□□□ -0.62
IRF9-211ENST00000560852 ITPR1Q14643 2758 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 TRAV17A0A0B4J275 112 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 RNF103-CHMP3A0A140T963 221 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 K7EM74 188 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 WWP2O00308 870 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 NR5A2O00482 541 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 NDUFAB1O14561 156 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 ANGPT2O15123 496 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 IL33O95760 270 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 ALOX5P09917 674 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 FAM87AP0C7U9 286 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 ACP2P11117 423 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 COX4I1P13073 169 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 EFNA1P20827 205 aaPredicted RBP11.16□□□□□ -0.62
IRF9-211ENST00000560852 MATN1P21941 496 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 CASRP41180 1078 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 ANXA11P50995 505 aaKnown RBP11.16□□□□□ -0.62
IRF9-211ENST00000560852 MRPS22P82650 360 aaKnown RBP11.16□□□□□ -0.62
IRF9-211ENST00000560852 LASP1Q14847 261 aaKnown RBP11.16□□□□□ -0.62
IRF9-211ENST00000560852 INAQ16352 499 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 DUSP5Q16690 384 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 TBCELQ5QJ74 424 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 ZNF468Q5VIY5 522 aaPredicted RBP11.16□□□□□ -0.62
IRF9-211ENST00000560852 RTL4Q6ZR62 310 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 GK5Q6ZS86 529 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 ASB18Q6ZVZ8 466 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 FITM2Q8N6M3 262 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 PCYOX1LQ8NBM8 494 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 DIO2Q92813 273 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 HGDQ93099 445 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 PNPLA2Q96AD5 504 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 ROPN1LQ96C74 230 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 C16orf58Q96GQ5 468 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 ANKRD27Q96NW4 1050 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 BARD1Q99728 777 aaKnown RBP11.16□□□□□ -0.62
IRF9-211ENST00000560852 GPATCH1Q9BRR8 931 aaKnown RBP11.16□□□□□ -0.62
IRF9-211ENST00000560852 RAD21L1Q9H4I0 556 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 SERHL2Q9H4I8 314 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 HHATLQ9HCP6 504 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 POLE3Q9NRF9 147 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 VAPAQ9P0L0 249 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 LRFN1Q9P244 771 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 ARMCX1Q9P291 453 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 PRDM4Q9UKN5 801 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 CBLCQ9ULV8 474 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 FAF1Q9UNN5 650 aaPredicted RBP11.16□□□□□ -0.62
IRF9-211ENST00000560852 CORO2BQ9UQ03 480 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 LIPT1Q9Y234 373 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 B3GNT3Q9Y2A9 372 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 TP53TG5Q9Y2B4 290 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 SNX8Q9Y5X2 465 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 CHCHD2Q9Y6H1 151 aaPredicted RBP11.16□□□□□ -0.62
IRF9-211ENST00000560852 BSNQ9UPA5 3926 aa11.16□□□□□ -0.62
IRF9-211ENST00000560852 NPIPB9F8W1W9 429 aa11.15□□□□□ -0.62
IRF9-211ENST00000560852 FXYD1O00168 92 aa11.15□□□□□ -0.62
IRF9-211ENST00000560852 CLIC1O00299 241 aa11.15□□□□□ -0.62
IRF9-211ENST00000560852 ADAM10O14672 748 aa11.15□□□□□ -0.62
IRF9-211ENST00000560852 OR6B1O95007 311 aa11.15□□□□□ -0.62
IRF9-211ENST00000560852 KCNK2O95069 426 aa11.15□□□□□ -0.62
IRF9-211ENST00000560852 UNC5CO95185 931 aa11.15□□□□□ -0.62
IRF9-211ENST00000560852 SP1P08047 785 aa11.15□□□□□ -0.62
IRF9-211ENST00000560852 GABRA3P34903 492 aa11.15□□□□□ -0.62
IRF9-211ENST00000560852 SOX3P41225 446 aa11.15□□□□□ -0.62
IRF9-211ENST00000560852 PRKAG1P54619 331 aa11.15□□□□□ -0.62
IRF9-211ENST00000560852 PSMD4P55036 377 aaKnown RBP11.15□□□□□ -0.62
IRF9-211ENST00000560852 CORO7P57737 925 aa11.15□□□□□ -0.62
IRF9-211ENST00000560852 TP53BP2Q13625 1128 aa11.15□□□□□ -0.62
IRF9-211ENST00000560852 EFR3AQ14156 821 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms