RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 MAD2L1Q13257 205 aaPredicted RBP11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 HYAL4Q2M3T9 481 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 ZNF385BQ569K4 471 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 XKR7Q5GH72 579 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 TNFAIP8L3Q5GJ75 292 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 C6orf136Q5SQH8 315 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 IL23RQ5VWK5 629 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 CES4AQ5XG92 561 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 ZNF585AQ6P3V2 769 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 NCCRP1Q6ZVX7 275 aaPredicted RBP11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 CHERPQ8IWX8 916 aaKnown RBP11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 OR1J4Q8NGS1 313 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 OR6Y1Q8NGX8 325 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 SARAFQ96BY9 339 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 EFHD2Q96C19 240 aaPredicted RBP11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 MTERF3Q96E29 417 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 ELP4Q96EB1 424 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 FCRL1Q96LA6 429 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 VSTM2LQ96N03 204 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 GNRHR2Q96P88 292 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 BTBD9Q96Q07 612 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 NODALQ96S42 347 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 PRPF18Q99633 342 aaKnown RBP11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 VKORC1Q9BQB6 163 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 OSBPL11Q9BXB4 747 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 TP63Q9H3D4 680 aaPredicted RBP11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 PROK2Q9HC23 129 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 GALNT9Q9HCQ5 603 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 PLSCR2Q9NRY7 297 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 C19orf53Q9UNZ5 99 aaPredicted RBP11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 USP9YO00507 2555 aaPredicted RBP11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 EXPH5Q8NEV8 1989 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 SPTBN1Q01082 2364 aaKnown RBP11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 C15orf38-AP3S2A0A0A6YYH1 394 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 OR14I1A6ND48 311 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 PRAMEF25A6NGN4 478 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 OR6C70A6NIJ9 312 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 PRSS44E7EML9 344 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 PLOD2O00469 737 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 BCKDKO14874 412 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 SCAMP2O15127 329 aaKnown RBP11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 TO15178 435 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 HCN1O60741 890 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 ABCB7O75027 752 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 ICOSLGO75144 302 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 TRIM3O75382 744 aaPredicted RBP11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 IGHG3P01860 377 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 DHRS4L1P0CG22 281 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 CT45A8P0DMV1 189 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 CT45A9P0DMV2 189 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 PSPHP78330 225 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 MRPS22P82650 360 aaKnown RBP11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 EFR3AQ14156 821 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 PTGR1Q14914 329 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 GXYLT1Q4G148 440 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 CT45A2Q5DJT8 189 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 WLSQ5T9L3 541 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 XKRXQ6PP77 449 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 ANGPTL8Q6UXH0 198 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 NPSR1Q6W5P4 371 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 TRILQ7L0X0 811 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 WDR53Q7Z5U6 358 aaPredicted RBP11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 KIRREL3Q8IZU9 778 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 OR2L13Q8N349 312 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 ZNF808Q8N4W9 903 aaPredicted RBP11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 OR7A2PQ8NGA2 310 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 OR4N2Q8NGD1 307 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 ITLN2Q8WWU7 325 aaPredicted RBP11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 HGDQ93099 445 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 CHMP6Q96FZ7 201 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 SLC6A15Q9H2J7 730 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 C3orf14Q9HBI5 128 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 TMBIM4Q9HC24 238 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 Q9N2J8 555 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 PNPLA3Q9NST1 481 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 ATAD3AQ9NVI7 634 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 COQ3Q9NZJ6 369 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 MRTO4Q9UKD2 239 aaKnown RBP11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 MAPRE3Q9UPY8 281 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 SNX8Q9Y5X2 465 aa11.88□□□□□ -0.51
CTDSPL2-209ENST00000560620 ZNF407Q9C0G0 2248 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 A0A1W2PRB8 838 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 FIGNL2A6NMB9 653 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 AQP7O14520 342 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 ELAVL4P26378 380 aaKnown RBP11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 CDK9P50750 372 aaKnown RBP11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 ADORA2A-AS1P86434 159 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 PSG6Q00889 435 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 BST1Q10588 318 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 SNTA1Q13424 505 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 PDE7AQ13946 482 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 CASP8Q14790 479 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 DECR1Q16698 335 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 PGS1Q32NB8 556 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 VPS26BQ4G0F5 336 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 CPTPQ5TA50 214 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 TMEM211Q6ICI0 200 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 SLC30A6Q6NXT4 461 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 NUP43Q8NFH3 380 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms