RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 DEKP35659 375 aaKnown RBP16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 LIPJQ5W064 366 aa16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 OR5M10Q6IEU7 315 aa16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 C22orf34Q6ZV56 151 aa16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 WFDC8Q8IUA0 241 aa16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 TEX9Q8N6V9 391 aa16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 OR4K17Q8NGC6 315 aa16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 PYROXD1Q8WU10 500 aa16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 AKAP1Q92667 903 aaKnown RBP eCLIP16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 CDKL2Q92772 493 aa16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 COL21A1Q96P44 957 aa16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 ERP44Q9BS26 406 aa16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 STMN4Q9H169 189 aaPredicted RBP16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 ALG9Q9H6U8 611 aa16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 WHRNQ9P202 907 aa16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 PRODH2Q9UF12 536 aa16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 MTO1Q9Y2Z2 717 aaKnown RBP16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 SNX24Q9Y343 169 aa16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 OR6C70A6NIJ9 312 aa16.05■□□□□ 0.16
TSPAN3-208ENST00000560514 SEC14L5O43304 696 aa16.05■□□□□ 0.16
TSPAN3-208ENST00000560514 TNFRSF21O75509 655 aa16.05■□□□□ 0.16
TSPAN3-208ENST00000560514 WISP3O95389 354 aaPredicted RBP16.05■□□□□ 0.16
TSPAN3-208ENST00000560514 PLAUP00749 431 aa16.05■□□□□ 0.16
TSPAN3-208ENST00000560514 CGAP01215 116 aa16.05■□□□□ 0.16
TSPAN3-208ENST00000560514 GSTA2P09210 222 aa16.05■□□□□ 0.16
TSPAN3-208ENST00000560514 KRT20P35900 424 aa16.05■□□□□ 0.16
TSPAN3-208ENST00000560514 EXOSC7Q15024 291 aaKnown RBP16.05■□□□□ 0.16
TSPAN3-208ENST00000560514 CPSF6Q16630 551 aaKnown RBP eCLIP16.05■□□□□ 0.16
TSPAN3-208ENST00000560514 RAET1LQ5VY80 246 aa16.05■□□□□ 0.16
TSPAN3-208ENST00000560514 ZBED8Q8IZ13 594 aa16.05■□□□□ 0.16
TSPAN3-208ENST00000560514 TRIM31Q9BZY9 425 aa16.05■□□□□ 0.16
TSPAN3-208ENST00000560514 AMBRA1Q9C0C7 1298 aa16.05■□□□□ 0.16
TSPAN3-208ENST00000560514 RNF122Q9H9V4 155 aa16.05■□□□□ 0.16
TSPAN3-208ENST00000560514 H0YIV9 168 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 THBDP07204 575 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 FAM157CP0CG43 387 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 FCGR2AP12318 317 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 S1PR1P21453 382 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 DRD5P21918 477 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 GRK2P25098 689 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 PPICP45877 212 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 DSCR4P56555 118 aaPredicted RBP16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 RPS3AP61247 264 aaKnown RBP16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 CALCOCO2Q13137 446 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 SLMAPQ14BN4 828 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 FASTKD3Q14CZ7 662 aaKnown RBP16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 PON3Q15166 354 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 PPP4R4Q6NUP7 873 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 FAM111BQ6SJ93 734 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 UBTD2Q8WUN7 234 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 TMBIM1Q969X1 311 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 CPNE1Q99829 537 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 PLLPQ9Y342 182 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 EMC9Q9Y3B6 208 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 ZNF175Q9Y473 711 aa16.04■□□□□ 0.16
TSPAN3-208ENST00000560514 UBXN8O00124 270 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 ZIC3O60481 467 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 GUCY1B2O75343 617 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 ERAL1O75616 437 aaKnown RBP16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 PLGP00747 810 aaPredicted RBP16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 IL12BP29460 328 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 ARL1P40616 181 aaPredicted RBP16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 RAB10P61026 200 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 MAP4K2Q12851 820 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 EFR3AQ14156 821 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 SGCBQ16585 318 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 PRICKLE4Q2TBC4 344 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 ALKBH2Q6NS38 261 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 C3orf62Q6ZUJ4 267 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 RAPH1Q70E73 1250 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 FAM214BQ7L5A3 538 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 OR52R1Q8NGF1 315 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 FNDC9Q8TBE3 224 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 GFM2Q969S9 779 aaKnown RBP16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 ADOQ96SZ5 270 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 SERPINI1Q99574 410 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 TACO1Q9BSH4 297 aaKnown RBP16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 PRRG4Q9BZD6 226 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 NMRAL1Q9HBL8 299 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 AHSPQ9NZD4 102 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 PPP4R1LQ9P1A2 415 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 CDC42EP3Q9UKI2 254 aa16.03■□□□□ 0.16
TSPAN3-208ENST00000560514 FOXE1O00358 373 aaPredicted RBP16.02■□□□□ 0.16
TSPAN3-208ENST00000560514 UGDHO60701 494 aa16.02■□□□□ 0.16
TSPAN3-208ENST00000560514 KERAO60938 352 aa16.02■□□□□ 0.16
TSPAN3-208ENST00000560514 PIAS1O75925 651 aa16.02■□□□□ 0.16
TSPAN3-208ENST00000560514 SEMA3DO95025 777 aa16.02■□□□□ 0.16
TSPAN3-208ENST00000560514 KLK1P06870 262 aa16.02■□□□□ 0.16
TSPAN3-208ENST00000560514 CSNK2A2P19784 350 aaPredicted RBP16.02■□□□□ 0.16
TSPAN3-208ENST00000560514 ACVR1BP36896 505 aa16.02■□□□□ 0.16
TSPAN3-208ENST00000560514 FEN1P39748 380 aaKnown RBP16.02■□□□□ 0.16
TSPAN3-208ENST00000560514 CTBP2P56545 445 aa16.02■□□□□ 0.16
TSPAN3-208ENST00000560514 CAV1Q03135 178 aa16.02■□□□□ 0.16
TSPAN3-208ENST00000560514 CCNYL2Q5T2Q4 361 aa16.02■□□□□ 0.16
TSPAN3-208ENST00000560514 PAGE2Q7Z2X7 111 aa16.02■□□□□ 0.16
TSPAN3-208ENST00000560514 TBC1D1Q86TI0 1168 aaPredicted RBP16.02■□□□□ 0.16
TSPAN3-208ENST00000560514 SPATA4Q8NEY3 305 aa16.02■□□□□ 0.16
TSPAN3-208ENST00000560514 FBXW5Q969U6 566 aa16.02■□□□□ 0.16
TSPAN3-208ENST00000560514 UBXN10Q96LJ8 280 aa16.02■□□□□ 0.16
TSPAN3-208ENST00000560514 GPR22Q99680 433 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms