RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 COL21A1Q96P44 957 aa9.49□□□□□ -0.89
CDC42BPB-207ENST00000560492 SERPINI1Q99574 410 aa9.49□□□□□ -0.89
CDC42BPB-207ENST00000560492 PINK1Q9BXM7 581 aa9.49□□□□□ -0.89
CDC42BPB-207ENST00000560492 ZNF717Q9BY31 904 aaPredicted RBP9.49□□□□□ -0.89
CDC42BPB-207ENST00000560492 GSX2Q9BZM3 304 aa9.49□□□□□ -0.89
CDC42BPB-207ENST00000560492 IPPKQ9H8X2 491 aa9.49□□□□□ -0.89
CDC42BPB-207ENST00000560492 AHSPQ9NZD4 102 aa9.49□□□□□ -0.89
CDC42BPB-207ENST00000560492 FBXL2Q9UKC9 423 aa9.49□□□□□ -0.89
CDC42BPB-207ENST00000560492 PROCRQ9UNN8 238 aa9.49□□□□□ -0.89
CDC42BPB-207ENST00000560492 PLLPQ9Y342 182 aa9.49□□□□□ -0.89
CDC42BPB-207ENST00000560492 SNX24Q9Y343 169 aa9.49□□□□□ -0.89
CDC42BPB-207ENST00000560492 RNF11Q9Y3C5 154 aa9.49□□□□□ -0.89
CDC42BPB-207ENST00000560492 COL6A5A8TX70 2615 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 LRRC14BA6NHZ5 514 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 H0YIV9 168 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 SCO2O43819 266 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 GUCY1B2O75343 617 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 ESRRBO95718 433 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 IFNA2P01563 188 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 CRHP06850 196 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 ZNF708P17019 499 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 PTGDSP41222 190 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 CCNG1P51959 295 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 GFRA1P56159 465 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 CLDN18P56856 261 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 GPX6P59796 221 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 HMGCS1Q01581 520 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 DLG1Q12959 904 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 ZKSCAN8Q15776 578 aaPredicted RBP9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 C10orf62Q5T681 223 aaPredicted RBP9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 LCE2AQ5TA79 106 aaPredicted RBP9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 GOLGA7Q7Z5G4 137 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 ADGRE4PQ86SQ3 457 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 ISCA2Q86U28 154 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 PPP1R14CQ8TAE6 165 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 KCTD4Q8WVF5 259 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 FIG4Q92562 907 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 NXNL1Q96CM4 212 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 MRRFQ96E11 262 aaKnown RBP9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 UBXN10Q96LJ8 280 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 CDK15Q96Q40 435 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 UCN2Q96RP3 112 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 ATOH8Q96SQ7 321 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 ADOQ96SZ5 270 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 G6PC3Q9BUM1 346 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 MRPL1Q9BYD6 325 aaKnown RBP9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 PRRG4Q9BZD6 226 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 RRAGDQ9NQL2 400 aaPredicted RBP9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 ELOVL5Q9NYP7 299 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 MAT2BQ9NZL9 334 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 PPP4R1LQ9P1A2 415 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 PRODH2Q9UF12 536 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 PSME2Q9UL46 239 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 ZNF780BQ9Y6R6 833 aa9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 FBN1P35555 2871 aaKnown RBP9.48□□□□□ -0.89
CDC42BPB-207ENST00000560492 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 TCRBV9S1A1TA0A576 114 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 C1orf226A1L170 272 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 E7ESA3 106 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 H3BML4 177 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 HCRTR2O43614 444 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 UGDHO60701 494 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 SEMA3DO95025 777 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 CLDN9O95484 217 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 PLGP00747 810 aaPredicted RBP9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 PEPDP12955 493 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 TCP1P17987 556 aaKnown RBP9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 CSNK2A2P19784 350 aaPredicted RBP9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 TBXA2RP21731 343 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 GRK2P25098 689 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 CRABP2P29373 138 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 CCKARP32238 428 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 ALDH18A1P54886 795 aaKnown RBP9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 EEFSECP57772 596 aaKnown RBP9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 GNG11P61952 73 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 MRPS35P82673 323 aaKnown RBP9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 IFT88Q13099 833 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 CALCOCO2Q13137 446 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 STX5Q13190 355 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 TNK1Q13470 666 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 LTB4RQ15722 352 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 SGCBQ16585 318 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 FAM83EQ2M2I3 478 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 ERCC6LQ2NKX8 1250 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 PRICKLE4Q2TBC4 344 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 GRTP1Q5TC63 336 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 FAM180BQ6P0A1 224 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 KLC3Q6P597 504 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 TMEM81Q6P7N7 255 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 ZNF474Q6S9Z5 364 aaPredicted RBP9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 ZNF704Q6ZNC4 412 aaPredicted RBP9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 C3orf62Q6ZUJ4 267 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 LARP4Q71RC2 724 aaKnown RBP eCLIP9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 CCDC25Q86WR0 208 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 WFDC8Q8IUA0 241 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 ZNF610Q8N9Z0 462 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 CTHRC1Q96CG8 243 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 MCMBPQ9BTE3 642 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 STMN4Q9H169 189 aaPredicted RBP9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 DPH5Q9H2P9 285 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms