RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 TNFAIP8O95379 198 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 TNNI3P19429 210 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 S1PR1P21453 382 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 HPCAP84074 193 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 ZNF155Q12901 538 aaPredicted RBP10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 RAPSNQ13702 412 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 NR1D2Q14995 579 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 SEC23BQ15437 767 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 MAPK14Q16539 360 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 TYW3Q6IPR3 259 aaKnown RBP10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 OR10G2Q8NGC3 310 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 OR6C4Q8NGE1 309 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 IFI44Q8TCB0 444 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 GIPC3Q8TF64 312 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 CTHRC1Q96CG8 243 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 RMND5BQ96G75 393 aaPredicted RBP10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 DGAT2Q96PD7 388 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 SDF2Q99470 211 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 EPYCQ99645 322 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 CTRCQ99895 268 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 NDC1Q9BTX1 674 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 GRIP2Q9C0E4 1043 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 SLC7A5P2Q9GIP4 190 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 NMNAT1Q9HAN9 279 aaPredicted RBP10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 THSD1Q9NS62 852 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 PNPLA3Q9NST1 481 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 USE1Q9NZ43 259 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 C3orf18Q9UK00 162 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 WDR45Q9Y484 360 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 A0A0G2JPF8 293 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 IGHV5-10-1A0A0J9YXX1 117 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 VGLL3A8MV65 326 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 HNRNPCL2B2RXH8 293 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 HNRNPCL3B7ZW38 293 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 PLOD3O60568 738 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 BCAS1O75363 584 aaPredicted RBP10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 CPNE6O95741 557 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 HPRP00739 348 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 ALPPP05187 535 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 PABPC4LP0CB38 370 aaKnown RBP10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 HNRNPCL4P0DMR1 293 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 AGXTP21549 392 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 CLK3P49761 638 aaKnown RBP10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 KCNC4Q03721 635 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 DCST2Q5T1A1 773 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 PHF19Q5T6S3 580 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 GARNL3Q5VVW2 1013 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 USP51Q70EK9 711 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 SATL1Q86VE3 508 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 ST13P4Q8IZP2 240 aaPredicted RBP10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 TAGAPQ8N103 731 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 ZNF614Q8N883 585 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 COX18Q8N8Q8 333 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 ZNF555Q8NEP9 628 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 OR4C15Q8NGM1 316 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 OR52P1PQ8NH57 321 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 BBS10Q8TAM1 723 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 CNIH3Q8TBE1 160 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 ALPK1Q96QP1 1244 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 ZNF347Q96SE7 839 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 ING2Q9H160 280 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 NTMQ9P121 344 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 KCNE5Q9UJ90 142 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 SERTAD3Q9UJW9 196 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 MRPS33Q9Y291 106 aaKnown RBP10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 ORC6Q9Y5N6 252 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 A6NHS1 94 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 CPSF4LA6NMK7 179 aaKnown RBP10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 H3BNH8 94 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 DNAJB5O75953 348 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 GASTP01350 101 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 ALOX5P09917 674 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 ITGA2P17301 1181 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 RHCEP18577 417 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 AVPR2P30518 371 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 ANXA11P50995 505 aaKnown RBP10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 PSG6Q00889 435 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 ELOAQ14241 798 aaKnown RBP10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 NPTX1Q15818 432 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 MICAQ29983 383 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 CTU2Q2VPK5 515 aaKnown RBP10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 FAM69BQ5VUD6 431 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 FOXB2Q5VYV0 432 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 HEPHL1Q6MZM0 1159 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 B3GNT8Q7Z7M8 397 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 ZNF605Q86T29 641 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 ZNF595Q8IYB9 648 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 PIK3C3Q8NEB9 887 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 POP5Q969H6 163 aaKnown RBP10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 CCDC74BQ96LY2 380 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 TRNT1Q96Q11 434 aaKnown RBP10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 LMF1Q96S06 567 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 ADNPQ9H2P0 1102 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 LRRN3Q9H3W5 708 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 ZNF768Q9H5H4 540 aaKnown RBP10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 BCL2L10Q9HD36 194 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 RASSF1Q9NS23 344 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 CTSFQ9UBX1 484 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 SLC6A14Q9UN76 642 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 MYRFQ9Y2G1 1151 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms