RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 FAAH2Q6GMR7 532 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 FAM198BQ6UWH4 519 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 ENPP6Q6UWR7 440 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 RNF111Q6ZNA4 994 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 LANCL3Q6ZV70 420 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 CBLL1Q75N03 491 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 PATL1Q86TB9 770 aaKnown RBP10.44□□□□□ -0.74
USP3-218ENST00000560202 TMPRSS12Q86WS5 348 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 FAM86B1Q8N7N1 296 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 ZNF615Q8N8J6 731 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 OR7G1Q8NGA0 311 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 OR14A16Q8NHC5 309 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 FAM110BQ8TC76 370 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 METTL21AQ8WXB1 218 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 CDS1Q92903 461 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 PYURFQ96I23 114 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 FBXL20Q96IG2 436 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 STACQ99469 402 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 SEPHS2Q99611 448 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 EFHD1Q9BUP0 239 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 UGT2B28Q9BY64 529 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 SPRY4Q9C004 299 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 OR10A5Q9H207 317 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 PIGUQ9H490 435 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 EXD2Q9NVH0 621 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 TBCCD1Q9NVR7 557 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 ARMC1Q9NVT9 282 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 GIN1Q9NXP7 522 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 C3orf18Q9UK00 162 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 RPS6KA6Q9UK32 745 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 LIPT1Q9Y234 373 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 HEMK1Q9Y5R4 338 aaPredicted RBP10.44□□□□□ -0.74
USP3-218ENST00000560202 SLC34A2O95436 690 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 ZNF682O95780 498 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 DLGAP3O95886 979 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 CLPSP04118 112 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 CYC1P08574 325 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 NOVA1P51513 510 aaKnown RBP10.44□□□□□ -0.74
USP3-218ENST00000560202 CRISP3P54108 245 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 ZNF155Q12901 538 aaPredicted RBP10.44□□□□□ -0.74
USP3-218ENST00000560202 MED21Q13503 144 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 ELOAQ14241 798 aaKnown RBP10.44□□□□□ -0.74
USP3-218ENST00000560202 NCF4Q15080 339 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 FAM98BQ52LJ0 330 aaKnown RBP10.44□□□□□ -0.74
USP3-218ENST00000560202 GPAT3Q53EU6 434 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 CYBRD1Q53TN4 286 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 HEPHL1Q6MZM0 1159 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 C6orf15Q6UXA7 325 aaPredicted RBP10.44□□□□□ -0.74
USP3-218ENST00000560202 IZUMO2Q6UXV1 221 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 EIF3MQ7L2H7 374 aaKnown RBP10.44□□□□□ -0.74
USP3-218ENST00000560202 C16orf62Q7Z3J2 963 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 ANKRD37Q7Z713 158 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 PAPD5Q8NDF8 572 aaKnown RBP10.44□□□□□ -0.74
USP3-218ENST00000560202 SLC2A12Q8TD20 617 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 HOXB13Q92826 284 aaPredicted RBP10.44□□□□□ -0.74
USP3-218ENST00000560202 DAZLQ92904 295 aaKnown RBP10.44□□□□□ -0.74
USP3-218ENST00000560202 TAMM41Q96BW9 452 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 VSTM2LQ96N03 204 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 TRNT1Q96Q11 434 aaKnown RBP10.44□□□□□ -0.74
USP3-218ENST00000560202 TREX2Q9BQ50 279 aaPredicted RBP10.44□□□□□ -0.74
USP3-218ENST00000560202 LMF2Q9BU23 707 aaKnown RBP10.44□□□□□ -0.74
USP3-218ENST00000560202 CRB3Q9BUF7 120 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 OR8D2Q9GZM6 311 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 Q9H521 79 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 FOLH1BQ9HBA9 442 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 BCL2L10Q9HD36 194 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 DUSP22Q9NRW4 184 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 ADPRHL2Q9NX46 363 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 PADI1Q9ULC6 663 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 SCN2AQ99250 2005 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 FAM149AA5PLN7 773 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 EIF4E1BA6NMX2 242 aaKnown RBP10.43□□□□□ -0.74
USP3-218ENST00000560202 A8MVJ9 347 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 PFDN1O60925 122 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 PDE9AO76083 593 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 SOX30O94993 753 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 NKX2-2O95096 273 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 DDAH2O95865 285 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 IFNA14P01570 189 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 IGKV3-11P04433 115 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 CHRM4P08173 479 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 CCNYL3P0C7X3 344 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 RAP2AP10114 183 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 GABRA3P34903 492 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 SLC37A1P57057 533 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 CHRNB3Q05901 458 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 ZNHIT3Q15649 155 aaPredicted RBP10.43□□□□□ -0.74
USP3-218ENST00000560202 PRAMEF8Q5VWM4 474 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 PRAMEF7Q5VXH5 474 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 BORAQ6PGQ7 559 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 B3GNT6Q6ZMB0 384 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 TIPARPQ7Z3E1 657 aaKnown RBP10.43□□□□□ -0.74
USP3-218ENST00000560202 PQLC1Q8N2U9 271 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 ZNF321PQ8N8H1 164 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 COX18Q8N8Q8 333 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 OR10Q1Q8NGQ4 319 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 C16orf52Q8NHV5 167 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 BBS10Q8TAM1 723 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 GPR151Q8TDV0 419 aa10.43□□□□□ -0.74
USP3-218ENST00000560202 ZNF721Q8TF20 911 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms