RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 HOXA1P49639 335 aaPredicted RBP13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 GRB7Q14451 532 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 RNF111Q6ZNA4 994 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 SLC30A7Q8NEW0 376 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR5P2Q8WZ92 322 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 FAM212BQ9NTI7 297 aaPredicted RBP13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 NLKQ9UBE8 527 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 DNAJB11Q9UBS4 358 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 A0A0U1RQJ8 604 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 CIDEAO60543 219 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 LRCH4O75427 683 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 RAB3AP20336 220 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 PTNP21246 168 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 F2RL1P55085 397 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 MEP1BQ16820 701 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 ZNF791Q3KP31 576 aaPredicted RBP13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 SIRPB2Q5JXA9 342 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 TMEM71Q6P5X7 295 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 GCNT2Q8N0V5 402 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 FBXL16Q8N461 479 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR2T4Q8NH00 348 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR2T27Q8NH04 317 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 CDCA5Q96FF9 252 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 DERL2Q9GZP9 239 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 OSBPL2Q9H1P3 480 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 MAFBQ9Y5Q3 323 aaPredicted RBP13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 TULP4Q9NRJ4 1543 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 LOC730098B7Z3J9 87 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 NFYAP23511 347 aaPredicted RBP13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 MRPL21Q7Z2W9 205 aaKnown RBP13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR2T35Q8NGX2 323 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 ZNF486Q96H40 463 aaPredicted RBP13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 IMPA1P29218 277 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 GCH1P30793 250 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 CNN3Q15417 329 aaKnown RBP13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 LEG1Q6P5S2 330 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 TSGA13Q96PP4 275 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 SLC2A4RGQ9NR83 387 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 CUTCQ9NTM9 273 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 UFSP2Q9NUQ7 469 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 ANKRD30BLA7E2S9 258 aa13.21□□□□□ -0.3
CSPG4P12-202ENST00000559989 ZNF30P17039 623 aa13.21□□□□□ -0.3
CSPG4P12-202ENST00000559989 CTRB1P17538 263 aa13.21□□□□□ -0.3
CSPG4P12-202ENST00000559989 PTGER4P35408 488 aa13.21□□□□□ -0.3
CSPG4P12-202ENST00000559989 SF3B4Q15427 424 aaKnown RBP eCLIP13.21□□□□□ -0.3
CSPG4P12-202ENST00000559989 CTRB2Q6GPI1 263 aa13.21□□□□□ -0.3
CSPG4P12-202ENST00000559989 SLC24A5Q71RS6 500 aa13.21□□□□□ -0.3
CSPG4P12-202ENST00000559989 TMPRSS5Q9H3S3 457 aa13.21□□□□□ -0.3
CSPG4P12-202ENST00000559989 PRDM9Q9NQV7 894 aa13.21□□□□□ -0.3
CSPG4P12-202ENST00000559989 DCAF16Q9NXF7 216 aa13.21□□□□□ -0.3
CSPG4P12-202ENST00000559989 A0A096LPI6 279 aa13.21□□□□□ -0.3
CSPG4P12-202ENST00000559989 DDTLA6NHG4 134 aaPredicted RBP13.21□□□□□ -0.3
CSPG4P12-202ENST00000559989 DDCP20711 480 aa13.21□□□□□ -0.3
CSPG4P12-202ENST00000559989 NKPD1Q17RQ9 610 aa13.21□□□□□ -0.3
CSPG4P12-202ENST00000559989 SFT2D3Q587I9 215 aa13.21□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR1M1Q8NGA1 313 aa13.21□□□□□ -0.3
CSPG4P12-202ENST00000559989 TRMT2BQ96GJ1 504 aaKnown RBP13.21□□□□□ -0.3
CSPG4P12-202ENST00000559989 MGLLQ99685 303 aa13.21□□□□□ -0.3
CSPG4P12-202ENST00000559989 TRAV18A0A075B6X5 111 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 G6PDP11413 515 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 RAB28P51157 221 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 PTTG1IPP53801 180 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 NHLRC2Q8NBF2 726 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR10R2Q8NGX6 335 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 KCTD13Q8WZ19 329 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 DAZLQ92904 295 aaKnown RBP13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 TPPP3Q9BW30 176 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 SYNPO2LQ9H987 977 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 A0A1W2PQL4 384 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 LYRM1O43325 122 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 PYCR1P32322 319 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 NKX2-5P52952 324 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 DCUN1D3Q8IWE4 304 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 ALG3Q92685 438 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 HDHD5Q9BXW7 423 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR8D2Q9GZM6 311 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 A8MT66 165 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 UPK1BO75841 260 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 VEGFAP15692 232 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 TMEM11P17152 192 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 DRD5P21918 477 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 FAM74A1Q5RGS3 127 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 FBXW12Q6X9E4 464 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 RFPL4BQ6ZWI9 263 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 ZNF416Q9BWM5 594 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 TGIF2Q9GZN2 237 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 MKRN2Q9H000 416 aaKnown RBP13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 RNF32Q9H0A6 362 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 SLC6A14Q9UN76 642 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 SPATA31C2B4DYI2 1134 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 NSA2O95478 260 aaKnown RBP13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 STATHP02808 62 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 ADH5P11766 374 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 MRPS34P82930 218 aaKnown RBP13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 SNTB1Q13884 538 aaKnown RBP13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 ZNF704Q6ZNC4 412 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 HPSE2Q8WWQ2 592 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 INTS12Q96CB8 462 aaKnown RBP13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 GPR88Q9GZN0 384 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 A6NCN8 305 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms