RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 SUCLG1P53597 346 aaKnown RBP9.69□□□□□ -0.86
TRAF3-207ENST00000559734 MGAT5Q09328 741 aa9.69□□□□□ -0.86
TRAF3-207ENST00000559734 BCL2A1Q16548 175 aa9.69□□□□□ -0.86
TRAF3-207ENST00000559734 SGCBQ16585 318 aa9.69□□□□□ -0.86
TRAF3-207ENST00000559734 CDKL4Q5MAI5 379 aa9.69□□□□□ -0.86
TRAF3-207ENST00000559734 OR52R1Q8NGF1 315 aa9.69□□□□□ -0.86
TRAF3-207ENST00000559734 GRK7Q8WTQ7 553 aa9.69□□□□□ -0.86
TRAF3-207ENST00000559734 SMAP2Q8WU79 429 aaPredicted RBP9.69□□□□□ -0.86
TRAF3-207ENST00000559734 NEUROG1Q92886 237 aa9.69□□□□□ -0.86
TRAF3-207ENST00000559734 TMBIM1Q969X1 311 aa9.69□□□□□ -0.86
TRAF3-207ENST00000559734 COL21A1Q96P44 957 aa9.69□□□□□ -0.86
TRAF3-207ENST00000559734 TMEM204Q9BSN7 226 aa9.69□□□□□ -0.86
TRAF3-207ENST00000559734 ZNF717Q9BY31 904 aaPredicted RBP9.69□□□□□ -0.86
TRAF3-207ENST00000559734 PRRG4Q9BZD6 226 aa9.69□□□□□ -0.86
TRAF3-207ENST00000559734 SHARPINQ9H0F6 387 aa9.69□□□□□ -0.86
TRAF3-207ENST00000559734 STMN4Q9H169 189 aaPredicted RBP9.69□□□□□ -0.86
TRAF3-207ENST00000559734 POPDC3Q9HBV1 291 aa9.69□□□□□ -0.86
TRAF3-207ENST00000559734 GDF2Q9UK05 429 aaPredicted RBP9.69□□□□□ -0.86
TRAF3-207ENST00000559734 PLLPQ9Y342 182 aa9.69□□□□□ -0.86
TRAF3-207ENST00000559734 EMC9Q9Y3B6 208 aa9.69□□□□□ -0.86
TRAF3-207ENST00000559734 RNF115Q9Y4L5 304 aa9.69□□□□□ -0.86
TRAF3-207ENST00000559734 K7EPI3 171 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 OVOL3O00110 214 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 ACOX3O15254 700 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 SCO2O43819 266 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 SSX4O60224 188 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 ZIC3O60481 467 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 PIAS1O75925 651 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 PTX3P26022 381 aaPredicted RBP9.68□□□□□ -0.86
TRAF3-207ENST00000559734 IL12BP29460 328 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 KRT20P35900 424 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 FEN1P39748 380 aaKnown RBP9.68□□□□□ -0.86
TRAF3-207ENST00000559734 PIK3CBP42338 1070 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 CASP9P55211 416 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 CTBP2P56545 445 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 CLDN15P56746 228 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 B3GALT5-AS1P59052 145 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 ATP6V0D1P61421 351 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 RUNX1T1Q06455 604 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 STEAP4Q687X5 459 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 STAC2Q6ZMT1 411 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 FAM214BQ7L5A3 538 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 PDIK1LQ8N165 341 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 TEX9Q8N6V9 391 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 ADOQ96SZ5 270 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 RHNO1Q9BSD3 238 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 DDX47Q9H0S4 455 aaKnown RBP9.68□□□□□ -0.86
TRAF3-207ENST00000559734 RHOJQ9H4E5 214 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 ALG2Q9H553 416 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 ALG9Q9H6U8 611 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 DDX31Q9H8H2 851 aaKnown RBP9.68□□□□□ -0.86
TRAF3-207ENST00000559734 LRTM1Q9HBL6 345 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 SMYD2Q9NRG4 433 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 PPP4R1LQ9P1A2 415 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 LPAR3Q9UBY5 353 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 MTO1Q9Y2Z2 717 aaKnown RBP9.68□□□□□ -0.86
TRAF3-207ENST00000559734 ZNF175Q9Y473 711 aa9.68□□□□□ -0.86
TRAF3-207ENST00000559734 IGHV4-30-2A0A087WSY4 118 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 OR6C70A6NIJ9 312 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 UBFD1O14562 309 aaKnown RBP9.67□□□□□ -0.86
TRAF3-207ENST00000559734 TNFRSF21O75509 655 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 ERAL1O75616 437 aaKnown RBP9.67□□□□□ -0.86
TRAF3-207ENST00000559734 AQP8O94778 261 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 CD3EP07766 207 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 DANCRP0C864 163 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 FCGR2AP12318 317 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 PORP16435 677 aaPredicted RBP9.67□□□□□ -0.86
TRAF3-207ENST00000559734 ZNF16P17020 682 aaPredicted RBP9.67□□□□□ -0.86
TRAF3-207ENST00000559734 TCP1P17987 556 aaKnown RBP9.67□□□□□ -0.86
TRAF3-207ENST00000559734 S1PR1P21453 382 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 DEKP35659 375 aaKnown RBP9.67□□□□□ -0.86
TRAF3-207ENST00000559734 ARL1P40616 181 aaPredicted RBP9.67□□□□□ -0.86
TRAF3-207ENST00000559734 PIK3CGP48736 1102 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 DSCR4P56555 118 aaPredicted RBP9.67□□□□□ -0.86
TRAF3-207ENST00000559734 CLDN20P56880 219 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 RPS3AP61247 264 aaKnown RBP9.67□□□□□ -0.86
TRAF3-207ENST00000559734 POU4F1Q01851 419 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 STX5Q13190 355 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 E2F2Q14209 437 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 SLMAPQ14BN4 828 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 CPSF6Q16630 551 aaKnown RBP eCLIP9.67□□□□□ -0.86
TRAF3-207ENST00000559734 PRICKLE4Q2TBC4 344 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 CTU2Q2VPK5 515 aaKnown RBP9.67□□□□□ -0.86
TRAF3-207ENST00000559734 TMEM249Q2WGJ8 235 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 IL17RELQ6ZVW7 336 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 MILR1Q7Z6M3 343 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 ZNF619Q8N2I2 560 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 KBTBD8Q8NFY9 601 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 OR6K3Q8NGY3 331 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 LILRB1Q8NHL6 650 aaPredicted RBP9.67□□□□□ -0.86
TRAF3-207ENST00000559734 GFM2Q969S9 779 aaKnown RBP9.67□□□□□ -0.86
TRAF3-207ENST00000559734 TSPAN17Q96FV3 270 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 DSN1Q9H410 356 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 FOLH1BQ9HBA9 442 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 BARX1Q9HBU1 254 aaPredicted RBP9.67□□□□□ -0.86
TRAF3-207ENST00000559734 FANCFQ9NPI8 374 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 NUDT4Q9NZJ9 180 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 MAT2BQ9NZL9 334 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 PRODH2Q9UF12 536 aa9.67□□□□□ -0.86
TRAF3-207ENST00000559734 MRPS18CQ9Y3D5 142 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms