RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 PCDHGB4Q9UN71 923 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 A0A0G2JMM0 328 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 A0A1W2PPB8 328 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 A0A1W2PRS3 328 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 PINLYPA6NC86 204 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 KIR3DP1A8MWS1 328 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 KLRC4-KLRK1H3BQV0 150 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 TSPAN2O60636 221 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 REM1O75628 298 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 WISP2O76076 250 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 P04436 131 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 IL6P05231 212 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 ACP2P11117 423 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 GABRA3P34903 492 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 PIGAP37287 484 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 FASNP49327 2511 aaKnown RBP18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 MEOX1P50221 254 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 POLR2JP52435 117 aaKnown RBP18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 STX1BP61266 288 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 PLCXD2Q0VAA5 305 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 SPDYE7PQ495Y7 208 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 EXOSC6Q5RKV6 272 aaKnown RBP18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 ZNF324BQ6AW86 544 aaPredicted RBP18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 MFSD12Q6NUT3 480 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 NUP54Q7Z3B4 507 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 FUNDC1Q8IVP5 155 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 CLEC4FQ8N1N0 589 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 CPSF7Q8N684 471 aaKnown RBP18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 CDRT4Q8N9R6 151 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 SLC16A11Q8NCK7 471 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 OR5AK3PQ8NH89 298 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 DNAJB8Q8NHS0 232 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 SPPL2AQ8TCT8 520 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 SFXN5Q8TD22 340 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 FAR1Q8WVX9 515 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 HGDQ93099 445 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 MIB2Q96AX9 1013 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 CCDC115Q96NT0 180 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 SACM1LQ9NTJ5 587 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 GPATCH2Q9NW75 528 aa18.65■□□□□ 0.58
TSPAN3-207ENST00000559494 GXYLT2A0PJZ3 443 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 FAM234BA2RU67 622 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 TTC36A6NLP5 189 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 TP53I11O14683 189 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 UGT2B11O75310 529 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 NKX2-2O95096 273 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 HMGN2P05204 90 aaKnown RBP18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 NCF2P19878 526 aaPredicted RBP18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 TMED10P49755 219 aaKnown RBP18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 ATP4BP51164 291 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 ARFIP2P53365 341 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 TP53BP2Q13625 1128 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 LASP1Q14847 261 aaKnown RBP18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 ZNHIT3Q15649 155 aaPredicted RBP18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 CYP27C1Q4G0S4 372 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 ZCCHC12Q6PEW1 402 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 FAM180AQ6UWF9 173 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 FBXW8Q8N3Y1 598 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 BCORP1Q8N888 145 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 OR2M7Q8NG81 312 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 OR56A1Q8NGH5 318 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 GOT1L1Q8NHS2 421 aaPredicted RBP18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 FBXO30Q8TB52 745 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 SLC9A6Q92581 669 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 FRMD6Q96NE9 622 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 INPP5KQ9BT40 448 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 ZNF385DQ9H6B1 395 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 CNIH4Q9P003 139 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 OR10H1Q9Y4A9 318 aa18.64■□□□□ 0.57
TSPAN3-207ENST00000559494 PLA2G2AP14555 144 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 CD1EP15812 388 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 MST1P26927 711 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 SOAT1P35610 550 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 CDKN2CP42773 168 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 DNASE1L1P49184 302 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 FOXK1P85037 733 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 DUSP5Q16690 384 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 RNFT1Q5M7Z0 435 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 PRAMEF20Q5VT98 475 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 BICRALQ6AI39 1079 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 C6orf120Q7Z4R8 191 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 FAM98AQ8NCA5 519 aaKnown RBP18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 GPR151Q8TDV0 419 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 PIK3R3Q92569 461 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 VPS33AQ96AX1 596 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 MOAP1Q96BY2 351 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 NTNG2Q96CW9 530 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 OTUB1Q96FW1 271 aaPredicted RBP18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 SLC35A4Q96G79 324 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 COL21A1Q96P44 957 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 NODALQ96S42 347 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 ADOQ96SZ5 270 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 SECISBP2Q96T21 854 aaKnown RBP18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 Q9N2J8 555 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 SERHLQ9NQF3 203 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 AGPAT4Q9NRZ5 378 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 CBLCQ9ULV8 474 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 ESPL1Q14674 2120 aa18.63■□□□□ 0.57
TSPAN3-207ENST00000559494 OR6C70A6NIJ9 312 aa18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 PYCARD-AS1I3L0S3 204 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms