RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ACAP2Q15057 778 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 TOMM20Q15388 145 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 NNATQ16517 81 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 GXYLT1Q4G148 440 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 C6orf163Q5TEZ5 329 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 SLC22A10Q63ZE4 541 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 TMEM211Q6ICI0 200 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 VHLLQ6RSH7 139 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 CYS1Q717R9 158 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 SLC29A4Q7RTT9 530 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 TMEM200AQ86VY9 491 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 NUDT13Q86X67 352 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 PRR22Q8IZ63 422 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 FAM109AQ8N4B1 249 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 OR10G3Q8NGC4 313 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 OR52B6Q8NGF0 335 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 C16orf52Q8NHV5 167 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 PHF10Q8WUB8 498 aaKnown RBP6.74□□□□□ -1.33
SPG11-213ENST00000558988 RIT1Q92963 219 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 SPACA9Q96E40 222 aaPredicted RBP6.74□□□□□ -1.33
SPG11-213ENST00000558988 AJUBAQ96IF1 538 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 ART5Q96L15 291 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 MRPL1Q9BYD6 325 aaKnown RBP6.74□□□□□ -1.33
SPG11-213ENST00000558988 SLC6A15Q9H2J7 730 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 PIF1Q9H611 641 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 ZNF703Q9H7S9 590 aaPredicted RBP6.74□□□□□ -1.33
SPG11-213ENST00000558988 MS4A12Q9NXJ0 267 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.74□□□□□ -1.33
SPG11-213ENST00000558988 A0A0A6YYD5 115 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 C15orf38-AP3S2A0A0A6YYH1 394 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 TRGV5A0A0B4J1U4 118 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 TRIM49D1C9J1S8 452 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 OR7A17O14581 309 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 PGRMC2O15173 223 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 SMIM24O75264 130 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 SCELO95171 688 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 CLDN9O95484 217 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 GPR75O95800 540 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 KLK1P06870 262 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 NT5EP21589 574 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 PTX3P26022 381 aaPredicted RBP6.73□□□□□ -1.33
SPG11-213ENST00000558988 ACVR2AP27037 513 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 GDF1P27539 372 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 PIK3R1P27986 724 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 CHRNB4P30926 498 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 PIK3CBP42338 1070 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 ALDH9A1P49189 494 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 WNT3P56703 355 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 MYBPHQ13203 477 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 SLC10A1Q14973 349 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 PIGGQ5H8A4 983 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 TECRLQ5HYJ1 363 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 EMC4Q5J8M3 183 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 WLSQ5T9L3 541 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 NDUFAF5Q5TEU4 345 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 LIPJQ5W064 366 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 OR52E8Q6IFG1 317 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 FAM180BQ6P0A1 224 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 TAOK1Q7L7X3 1001 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 WDR53Q7Z5U6 358 aaPredicted RBP6.73□□□□□ -1.33
SPG11-213ENST00000558988 LIX1Q8N485 282 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 RHEBL1Q8TAI7 183 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 ASB5Q8WWX0 329 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 DIO2Q92813 273 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 TANKQ92844 425 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 FBXL20Q96IG2 436 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 SGCZQ96LD1 299 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 HBEGFQ99075 208 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 PAFAH2Q99487 392 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 DOHHQ9BU89 302 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 BRINP2Q9C0B6 783 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 CDC42EP4Q9H3Q1 356 aaKnown RBP6.73□□□□□ -1.33
SPG11-213ENST00000558988 ELOVL6Q9H5J4 265 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 IL1RL2Q9HB29 575 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 KCNJ16Q9NPI9 418 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 PFDN4Q9NQP4 134 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 FARSBQ9NSD9 589 aaKnown RBP6.73□□□□□ -1.33
SPG11-213ENST00000558988 ZDHHC18Q9NUE0 388 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.73□□□□□ -1.33
SPG11-213ENST00000558988 LYARQ9NX58 379 aaKnown RBP6.73□□□□□ -1.33
SPG11-213ENST00000558988 TEX10Q9NXF1 929 aaPredicted RBP6.73□□□□□ -1.33
SPG11-213ENST00000558988 XPR1Q9UBH6 696 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 BOKQ9UMX3 212 aaPredicted RBP6.73□□□□□ -1.33
SPG11-213ENST00000558988 SLC12A4Q9UP95 1085 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 TNPO3Q9Y5L0 923 aaKnown RBP6.73□□□□□ -1.33
SPG11-213ENST00000558988 NINQ8N4C6 2090 aa6.73□□□□□ -1.33
SPG11-213ENST00000558988 INTS1Q8N201 2190 aaKnown RBP6.72□□□□□ -1.33
SPG11-213ENST00000558988 C2orf92A0A1B0GVN3 265 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 SYNDIG1LA6NDD5 238 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 H0YIV9 168 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 BCKDKO14874 412 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 SMAD7O15105 426 aaKnown RBP6.72□□□□□ -1.33
SPG11-213ENST00000558988 PROM1O43490 865 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 ERAL1O75616 437 aaKnown RBP6.72□□□□□ -1.33
SPG11-213ENST00000558988 TRAPPC6AO75865 159 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 NADKO95544 446 aaPredicted RBP6.72□□□□□ -1.33
SPG11-213ENST00000558988 ESRRBO95718 433 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 IGKV3-11P04433 115 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 CT62P0C5K7 136 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 RFPL3SP0C7P2 107 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms