RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 FASTKQ14296 549 aaKnown RBP1.33□□□□□ -2.2
USP3-209ENST00000558925 UBE2V2Q15819 145 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 CCDC6Q16204 474 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 MAPK6Q16659 721 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 CDKN3Q16667 212 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 HAGHQ16775 308 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 PCK2Q16822 640 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 MTHFSDQ2M296 383 aaKnown RBP1.33□□□□□ -2.2
USP3-209ENST00000558925 CCDC57Q2TAC2 916 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 MS4A18Q3C1V0 323 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 POM121L1PQ3SYA9 428 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 LINC01620Q4KN68 170 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 FAM74A3Q4VXF1 159 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 C2CD6Q53TS8 623 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 RABGAP1LQ5R372 815 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 BEND6Q5SZJ8 279 aaPredicted RBP1.33□□□□□ -2.2
USP3-209ENST00000558925 LEMD1Q68G75 181 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 PYHIN1Q6K0P9 492 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 NIPAL3Q6P499 406 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 LEG1Q6P5S2 330 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 RFWD3Q6PCD5 774 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 ATRAIDQ6UW56 229 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 ABRAXAS1Q6UWZ7 409 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 RGS9BPQ6ZS82 235 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 MOB2Q70IA6 237 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 TIPARPQ7Z3E1 657 aaKnown RBP1.33□□□□□ -2.2
USP3-209ENST00000558925 RPAINQ86UA6 219 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 LRRTM1Q86UE6 522 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 KRTAP7-1Q8IUC3 87 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 CBWD2Q8IUF1 395 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 ZDHHC21Q8IVQ6 265 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 LINC01561Q8N1V8 128 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 SAMD12Q8N8I0 201 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 OR1B1Q8NGR6 318 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 OR10T2Q8NGX3 314 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 NANPQ8TBE9 248 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 M1APQ8TC57 530 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 U2AF1L4Q8WU68 220 aaKnown RBP1.33□□□□□ -2.2
USP3-209ENST00000558925 RPL3LQ92901 407 aaKnown RBP1.33□□□□□ -2.2
USP3-209ENST00000558925 ART4Q93070 314 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 UPRTQ96BW1 309 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 C11orf24Q96F05 449 aaPredicted RBP1.33□□□□□ -2.2
USP3-209ENST00000558925 POM121L2Q96KW2 1035 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 TSPAN18Q96SJ8 248 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 IWS1Q96ST2 819 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 MYCBPQ99417 103 aaPredicted RBP1.33□□□□□ -2.2
USP3-209ENST00000558925 TXN2Q99757 166 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 CRACR2AQ9BSW2 395 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 SYT11Q9BT88 431 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 TMEM121Q9BTD3 319 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 TBCDQ9BTW9 1192 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 ZSCAN5AQ9BUG6 496 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 WRAP53Q9BUR4 548 aaKnown RBP1.33□□□□□ -2.2
USP3-209ENST00000558925 FICDQ9BVA6 458 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 RBM24Q9BX46 236 aaKnown RBP1.33□□□□□ -2.2
USP3-209ENST00000558925 GPR174Q9BXC1 333 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 TBC1D10AQ9BXI6 508 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 FGFBP2Q9BYJ0 223 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 BARHL1Q9BZE3 327 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 STRADBQ9C0K7 418 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 RNF41Q9H4P4 317 aaPredicted RBP1.33□□□□□ -2.2
USP3-209ENST00000558925 DHX33Q9H6R0 707 aaKnown RBP1.33□□□□□ -2.2
USP3-209ENST00000558925 RPAP3Q9H6T3 665 aaPredicted RBP1.33□□□□□ -2.2
USP3-209ENST00000558925 WDR76Q9H967 626 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 TRPV5Q9NQA5 729 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.33□□□□□ -2.2
USP3-209ENST00000558925 DUS2Q9NX74 493 aaKnown RBP1.33□□□□□ -2.2
USP3-209ENST00000558925 SMPD3Q9NY59 655 aaPredicted RBP1.33□□□□□ -2.2
USP3-209ENST00000558925 SEC14L4Q9UDX3 406 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 TUBGCP4Q9UGJ1 667 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 EMCNQ9ULC0 261 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 MGAT4AQ9UM21 535 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 SLC9A8Q9Y2E8 581 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 STYXL1Q9Y6J8 313 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 METP08581 1390 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 KDRP35968 1356 aa1.33□□□□□ -2.2
USP3-209ENST00000558925 SYNJ2O15056 1496 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 IGHV3-16A0A0C4DH30 117 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 FBLL1A6NHQ2 334 aaKnown RBP1.32□□□□□ -2.2
USP3-209ENST00000558925 ZSCAN5BA6NJL1 495 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 CCT8L1PA6NM43 557 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 A8MXK9 166 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 GPR89AB7ZAQ6 455 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 K7EQM0 130 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 MPHOSPH10O00566 681 aaKnown RBP1.32□□□□□ -2.2
USP3-209ENST00000558925 TRAFD1O14545 582 aaPredicted RBP1.32□□□□□ -2.2
USP3-209ENST00000558925 EI24O14681 340 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 ANGPT2O15123 496 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 STX7O15400 261 aaKnown RBP1.32□□□□□ -2.2
USP3-209ENST00000558925 LRRTM2O43300 516 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 ARHGEF9O43307 516 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 RIPK2O43353 540 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 PI15O43692 258 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 DUX1O43812 170 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 MTX2O75431 263 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 JCHAINP01591 159 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 IGHV3-9P01782 118 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 CSF2P04141 144 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 GSTA1P08263 222 aa1.32□□□□□ -2.2
USP3-209ENST00000558925 SLC35G4P0C7Q5 338 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms