RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	FAM180B	Q6P0A1	224 aa		6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	KLC3	Q6P597	504 aa		6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	FAM111B	Q6SJ93	734 aa		6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	B3GNT6	Q6ZMB0	384 aa		6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	SEM1	Q6ZVN7	128 aa		6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	SLC29A4	Q7RTT9	530 aa		6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	TRABD2A	Q86V40	505 aa		6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	SLC22A8	Q8TCC7	542 aa		6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	PAQR8	Q8TEZ7	354 aa		6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	ATP6V1E2	Q96A05	226 aa		6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	C14orf79	Q96F83	325 aa		6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	ATP6V1G3	Q96LB4	118 aa		6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	HBEGF	Q99075	208 aa		6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	ZNF703	Q9H7S9	590 aa	Predicted RBP	6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	CXorf21	Q9HAI6	301 aa		6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	ZBTB26	Q9HCK0	441 aa		6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	LYAR	Q9NX58	379 aa	Known RBP	6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	PCTP	Q9UKL6	214 aa		6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	CNOT11	Q9UKZ1	510 aa	Known RBP	6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	TSC22D4	Q9Y3Q8	395 aa		6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	HCFC1	P51610	2035 aa		6.41	□□□□□ -1.38
MARK3-215	ENST00000558787	PHF3	Q92576	2039 aa	Known RBP	6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	MED12	Q93074	2177 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	C2orf92	A0A1B0GVN3	265 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	OR14I1	A6ND48	311 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	SYNDIG1L	A6NDD5	238 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	FOXE1	O00358	373 aa	Predicted RBP	6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	BCKDK	O14874	412 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	SUSD5	O60279	629 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	HCN1	O60741	890 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	TRIM3	O75382	744 aa	Predicted RBP	6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	TRAPPC6A	O75865	159 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	HOXD4	P09016	255 aa	Predicted RBP	6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	SBK3	P0C264	359 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	COL6A2	P12110	1019 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	KRT4	P19013	534 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	CAPN3	P20807	821 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	S1PR1	P21453	382 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	NT5E	P21589	574 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	PIK3R1	P27986	724 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	SERPINB3	P29508	390 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	FEN1	P39748	380 aa	Known RBP	6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	CCNG1	P51959	295 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	MAGOH	P61326	146 aa	Known RBP	6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	PHEX	P78562	749 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	DUSP2	Q05923	314 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	TRAF3	Q13114	568 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	DUSP8	Q13202	625 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	MYBPH	Q13203	477 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	BIK	Q13323	160 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	EXOSC7	Q15024	291 aa	Known RBP	6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	TESK1	Q15569	626 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	TCHHL1	Q5QJ38	904 aa	Predicted RBP	6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	CCNYL2	Q5T2Q4	361 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	C1orf185	Q5T7R7	199 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	WLS	Q5T9L3	541 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	FRG2	Q64ET8	278 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	OR52E8	Q6IFG1	317 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	WDR53	Q7Z5U6	358 aa	Predicted RBP	6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	MILR1	Q7Z6M3	343 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	NUDT13	Q86X67	352 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	ULK2	Q8IYT8	1036 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	LRRC25	Q8N386	305 aa	Predicted RBP	6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	FBXW8	Q8N3Y1	598 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	SLC15A4	Q8N697	577 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	ZNF615	Q8N8J6	731 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	ZNF441	Q8N8Z8	693 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	ADCY4	Q8NFM4	1077 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	OR4F6	Q8NGB9	312 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	OR4K14	Q8NGD5	310 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	MZB1	Q8WU39	189 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	DIO2	Q92813	273 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	SARAF	Q96BY9	339 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	TLCD1	Q96CP7	247 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	REPS1	Q96D71	796 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	ART5	Q96L15	291 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	RILP	Q96NA2	401 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	GNRHR2	Q96P88	292 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	ALPK1	Q96QP1	1244 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	FRG2B	Q96QU4	278 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	SERPINI1	Q99574	410 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	ZNF559	Q9BR84	538 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	DOHH	Q9BU89	302 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	WDR41	Q9HAD4	459 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	MKS1	Q9NXB0	559 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	CNIH4	Q9P003	139 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	XPR1	Q9UBH6	696 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	BOK	Q9UMX3	212 aa	Predicted RBP	6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	SLC12A4	Q9UP95	1085 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	DTX4	Q9Y2E6	619 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	SLC6A5	Q9Y345	797 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	TNPO3	Q9Y5L0	923 aa	Known RBP	6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	NPFFR2	Q9Y5X5	522 aa		6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	HRNR	Q86YZ3	2850 aa	Predicted RBP	6.4	□□□□□ -1.38
MARK3-215	ENST00000558787	FREM3	P0C091	2139 aa		6.4	□□□□□ -1.39
MARK3-215	ENST00000558787	ANKHD1	Q8IWZ3	2542 aa	Known RBP	6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	C15orf38-AP3S2	A0A0A6YYH1	394 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	OR6C76	A6NM76	312 aa		6.39	□□□□□ -1.39

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