RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 IL1RNP18510 177 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 MYF6P23409 242 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 CRYZQ08257 329 aaKnown RBP13.28□□□□□ -0.28
SPG11-210ENST00000558319 RAB30Q15771 203 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 RAB6CQ53S08 254 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 VHLLQ6RSH7 139 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 C2CD4AQ8NCU7 369 aaPredicted RBP13.28□□□□□ -0.28
SPG11-210ENST00000558319 CMASQ8NFW8 434 aaPredicted RBP13.28□□□□□ -0.28
SPG11-210ENST00000558319 MAL2Q969L2 176 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 RAB6CQ9H0N0 254 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 COPS3Q9UNS2 423 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 ZNF175Q9Y473 711 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 LOC102723532A0A0G2JNH3 316 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 PIM1P11309 404 aaPredicted RBP13.28□□□□□ -0.28
SPG11-210ENST00000558319 CD79AP11912 226 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 MAOAP21397 527 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 ATP4BP51164 291 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 GALNT1Q10472 559 aaPredicted RBP13.28□□□□□ -0.28
SPG11-210ENST00000558319 OR5M10Q6IEU7 315 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 DIO2Q92813 273 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 DEFB126Q9BYW3 111 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 HTR1EP28566 365 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 EEF1A1P5Q5VTE0 462 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 LCN10Q6JVE6 187 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 TIFABQ6ZNK6 161 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 OR4K14Q8NGD5 310 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 SPRYD4Q8WW59 207 aaPredicted RBP13.28□□□□□ -0.28
SPG11-210ENST00000558319 SLCO2A1Q92959 643 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 FAM46BQ96A09 425 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 RPS10-NUDT3A0A1W2PQS6 291 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 DOK2O60496 412 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 ATE1O95260 518 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 RPS10P46783 165 aaKnown RBP13.27□□□□□ -0.28
SPG11-210ENST00000558319 SELENOVP59797 346 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 RFTN1Q14699 578 aaPredicted RBP13.27□□□□□ -0.28
SPG11-210ENST00000558319 PTPRRQ15256 657 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 ATOH1Q92858 354 aaPredicted RBP13.27□□□□□ -0.28
SPG11-210ENST00000558319 ST6GALNAC5Q9BVH7 336 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 PPA2Q9H2U2 334 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 PLCXD1Q9NUJ7 323 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 TMEM59LQ9UK28 342 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 HEMK1Q9Y5R4 338 aaPredicted RBP13.27□□□□□ -0.28
SPG11-210ENST00000558319 CACNG2Q9Y698 323 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 MT-ND4P03905 459 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 FBXO45P0C2W1 286 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 SNHG28P0DPA3 235 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 CD9P21926 228 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 NDUFS1P28331 727 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 ETV4P43268 484 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 FAM189BP81408 668 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 TMEM31Q5JXX7 168 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 C3P1Q6ZMU1 363 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 NATD1Q8N6N6 113 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 OR8J3Q8NGG0 315 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 IRF7Q92985 503 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 ACDQ96AP0 544 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 KCNJ16Q9NPI9 418 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 HAO2Q9NYQ3 351 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 C19orf25Q9UFG5 118 aaPredicted RBP13.27□□□□□ -0.28
SPG11-210ENST00000558319 SLC7A11Q9UPY5 501 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 MYH8P13535 1937 aa13.27□□□□□ -0.28
SPG11-210ENST00000558319 CBSLP0DN79 551 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 CBSP35520 551 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 SIM1P81133 766 aaPredicted RBP13.27□□□□□ -0.29
SPG11-210ENST00000558319 SHC2P98077 582 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 MGAT3Q09327 533 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 RSU1Q15404 277 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 LMNTD1Q8N9Z9 388 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 SUMF2Q8NBJ7 301 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 KCTD13Q8WZ19 329 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 ZNF775Q96BV0 537 aaPredicted RBP13.27□□□□□ -0.29
SPG11-210ENST00000558319 URM1Q9BTM9 101 aaKnown RBP13.27□□□□□ -0.29
SPG11-210ENST00000558319 TGIF2Q9GZN2 237 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 MKRN2Q9H000 416 aaKnown RBP13.27□□□□□ -0.29
SPG11-210ENST00000558319 APOBEC3BQ9UH17 382 aaKnown RBP13.27□□□□□ -0.29
SPG11-210ENST00000558319 A0A096LPI6 279 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 ARPC1BO15143 372 aaKnown RBP13.27□□□□□ -0.29
SPG11-210ENST00000558319 B4GAT1O43505 415 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 KCNC1P48547 511 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 ELOCQ15369 112 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 OR14L1PQ8NHC6 308 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 UNKLQ9H9P5 680 aaKnown RBP13.27□□□□□ -0.29
SPG11-210ENST00000558319 GCM1Q9NP62 436 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.27□□□□□ -0.29
SPG11-210ENST00000558319 IRF2P14316 349 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 PITPNBP48739 271 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 RAB5CP51148 216 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 CLDN2P57739 230 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 DNAJB13P59910 316 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 HSD11B2P80365 405 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 SLAMF7Q9NQ25 335 aa13.27□□□□□ -0.29
SPG11-210ENST00000558319 AK6Q9Y3D8 172 aaKnown RBP13.27□□□□□ -0.29
SPG11-210ENST00000558319 MPPED1O15442 326 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 HPGDSO60760 199 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 ADH1BP00325 375 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 ATG9BQ674R7 924 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 TIGD3Q6B0B8 471 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 ZNF705AQ6ZN79 300 aaPredicted RBP13.26□□□□□ -0.29
SPG11-210ENST00000558319 CREB3L4Q8TEY5 395 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 TOMM40LQ969M1 308 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms