RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 RNFT1Q5M7Z0 435 aa12.95□□□□□ -0.34
SLIRP-207ENST00000556831 CPTPQ5TA50 214 aa12.95□□□□□ -0.34
SLIRP-207ENST00000556831 LYPD8Q6UX82 237 aa12.95□□□□□ -0.34
SLIRP-207ENST00000556831 NUP54Q7Z3B4 507 aa12.95□□□□□ -0.34
SLIRP-207ENST00000556831 SPPL2CQ8IUH8 684 aa12.95□□□□□ -0.34
SLIRP-207ENST00000556831 SLC44A2Q8IWA5 706 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-207ENST00000556831 CEP70Q8NHQ1 597 aa12.95□□□□□ -0.34
SLIRP-207ENST00000556831 SPPL2AQ8TCT8 520 aa12.95□□□□□ -0.34
SLIRP-207ENST00000556831 TMBIM1Q969X1 311 aa12.95□□□□□ -0.34
SLIRP-207ENST00000556831 CIDECQ96AQ7 238 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-207ENST00000556831 ATP6V1G3Q96LB4 118 aa12.95□□□□□ -0.34
SLIRP-207ENST00000556831 C3orf30Q96M34 536 aa12.95□□□□□ -0.34
SLIRP-207ENST00000556831 RILPQ96NA2 401 aa12.95□□□□□ -0.34
SLIRP-207ENST00000556831 COL21A1Q96P44 957 aa12.95□□□□□ -0.34
SLIRP-207ENST00000556831 NUF2Q9BZD4 464 aa12.95□□□□□ -0.34
SLIRP-207ENST00000556831 ANKRA2Q9H9E1 313 aa12.95□□□□□ -0.34
SLIRP-207ENST00000556831 ZFP64Q9NPA5 681 aa12.95□□□□□ -0.34
SLIRP-207ENST00000556831 EQTNQ9NQ60 294 aa12.95□□□□□ -0.34
SLIRP-207ENST00000556831 ACSS1Q9NUB1 689 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-207ENST00000556831 TUBA8Q9NY65 449 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-207ENST00000556831 PRDM4Q9UKN5 801 aa12.95□□□□□ -0.34
SLIRP-207ENST00000556831 C19orf53Q9UNZ5 99 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-207ENST00000556831 GPR55Q9Y2T6 319 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-207ENST00000556831 ABCA2Q9BZC7 2435 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 ICE1Q9Y2F5 2266 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 PINLYPA6NC86 204 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 ANKRD33BA6NCL7 494 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 TTC36A6NLP5 189 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 SLCO1B7G3V0H7 640 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 TO15178 435 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 SASH3O75995 380 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 TPOP07202 933 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 IFI6P09912 130 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 GDF1P27539 372 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 GCKP35557 465 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 CA7P43166 264 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 MAGEA5P43359 124 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 MAN2A2P49641 1150 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 PRKAG1P54619 331 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 HSF1Q00613 529 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 EMX2Q04743 252 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 PDE7AQ13946 482 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 SLC10A1Q14973 349 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 TOMM20Q15388 145 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 SPDYE7PQ495Y7 208 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 CMPK2Q5EBM0 449 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 ZNF551Q7Z340 670 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-207ENST00000556831 OR2L13Q8N349 312 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 TMEM251Q8N6I4 163 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 SIMC1Q8NDZ2 872 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 OR52N2Q8NGI0 321 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 ELP4Q96EB1 424 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 CHMP6Q96FZ7 201 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 VSTM2LQ96N03 204 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 SORT1Q99523 831 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 OSBPL11Q9BXB4 747 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 MANSC1Q9H8J5 431 aa12.94□□□□□ -0.34
SLIRP-207ENST00000556831 ZNF395Q9H8N7 513 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-207ENST00000556831 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-207ENST00000556831 CNOT11Q9UKZ1 510 aaKnown RBP12.94□□□□□ -0.34
SLIRP-207ENST00000556831 EXO1Q9UQ84 846 aaKnown RBP12.94□□□□□ -0.34
SLIRP-207ENST00000556831 A0A1B0GTH9 108 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 A0A1W2PRB8 838 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 PRAMEF25A6NGN4 478 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 OR6C70A6NIJ9 312 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 HMGB1P1B2RPK0 211 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-207ENST00000556831 UPK1AO00322 258 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 POLR3GO15318 223 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-207ENST00000556831 CFLARO15519 480 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 GLSO94925 669 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-207ENST00000556831 KCNH1O95259 989 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 LDLRP01130 860 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 ABCB1P08183 1280 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-207ENST00000556831 KITP10721 976 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 G6PDP11413 515 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 LBPP18428 481 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 SOX18P35713 384 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 WDR4P57081 412 aaKnown RBP12.93□□□□□ -0.34
SLIRP-207ENST00000556831 CORO7P57737 925 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 SNTA1Q13424 505 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 DECR1Q16698 335 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 PGS1Q32NB8 556 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 LSM12Q3MHD2 195 aaKnown RBP12.93□□□□□ -0.34
SLIRP-207ENST00000556831 CES4AQ5XG92 561 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 SLC30A6Q6NXT4 461 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 LARP4Q71RC2 724 aaKnown RBP eCLIP12.93□□□□□ -0.343e-8■□□□□ 10.8
SLIRP-207ENST00000556831 LRRC34Q8IZ02 419 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 LRRC8CQ8TDW0 803 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 JADE3Q92613 823 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 RELTQ969Z4 430 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 MS4A4EQ96PG1 132 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 ADOQ96SZ5 270 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 DPY30Q9C005 99 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 ZNF703Q9H7S9 590 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-207ENST00000556831 AKTIPQ9H8T0 292 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 ZDHHC11Q9H8X9 412 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 NEUROD4Q9HD90 331 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 SH2D2AQ9NP31 389 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 PNPOQ9NVS9 261 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 QPCTLQ9NXS2 382 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms