RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 SNX8Q9Y5X2 465 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 FITM1A5D6W6 292 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 SLC9B1P1A6NJY1 282 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 C5orf58C9J3I9 102 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PRSS44E7EML9 344 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ERAL1O75616 437 aaKnown RBP13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 NSA2O95478 260 aaKnown RBP13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 RECKO95980 971 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 EIF2S1P05198 315 aaKnown RBP13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 UQCRBP14927 111 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PPM1FP49593 454 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 CDK6Q00534 326 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 EPS8Q12929 822 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 CHAF1BQ13112 559 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 TESK1Q15569 626 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 CRB2Q5IJ48 1285 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 SLC6A19Q695T7 634 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 REEP3Q6NUK4 255 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 C6orf15Q6UXA7 325 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 SPNS3Q6ZMD2 512 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ZBTB49Q6ZSB9 765 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ZNF551Q7Z340 670 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PIWIL3Q7Z3Z3 882 aaKnown RBP13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 C6orf120Q7Z4R8 191 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 RNF130Q86XS8 419 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 FBXO30Q8TB52 745 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ZCCHC10Q8TBK6 192 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 N4BP2L2Q92802 583 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PNPLA2Q96AD5 504 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 SNRNP40Q96DI7 357 aaKnown RBP13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 C10orf90Q96M02 699 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 RDH12Q96NR8 316 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 SEPHS2Q99611 448 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 OSBPL11Q9BXB4 747 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ULBP3Q9BZM4 244 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 SOHLH2Q9NX45 425 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 CALML5Q9NZT1 146 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 NTMQ9P121 344 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PTGFRNQ9P2B2 879 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 P2RX2Q9UBL9 471 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ZNF639Q9UID6 485 aa13.3□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PCSK5Q92824 1860 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 DUXAA6NLW8 204 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 H0YIG0 161 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PLOD2O00469 737 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PRKD3O94806 890 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 HPRP00739 348 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ETFAP13804 333 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ZNF28P17035 718 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ITGA2P17301 1181 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 EFNA1P20827 205 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 AVPR1BP47901 424 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 GABRA4P48169 554 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ARL4DP49703 201 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 CCL11P51671 97 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 HSD11B2P80365 405 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 MED21Q13503 144 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 TP53BP2Q13625 1128 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 GRM7Q14831 915 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 FAM214AQ32MH5 1076 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 LRRC23Q53EV4 343 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 HMBOX1Q6NT76 420 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ZC3H7AQ8IWR0 971 aaKnown RBP13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 MMP21Q8N119 569 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 GALNT6Q8NCL4 622 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PNPT1Q8TCS8 783 aaKnown RBP13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 KLHL6Q8WZ60 621 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 NCSTNQ92542 709 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 FKBP10Q96AY3 582 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 CNRIP1Q96F85 164 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ZNF597Q96LX8 424 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ZNF681Q96N22 645 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ZNF607Q96SK3 696 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 MACROD1Q9BQ69 325 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 SPATA5L1Q9BVQ7 753 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 SYNPO2LQ9H987 977 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 FANCEQ9HB96 536 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 IL1RAPQ9NPH3 570 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ZCCHC3Q9NUD5 404 aaKnown RBP13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ASF1BQ9NVP2 202 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 GPATCH2Q9NW75 528 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PADI2Q9Y2J8 665 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 NAALAD2Q9Y3Q0 740 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PCDHGA6Q9Y5G7 932 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PKDREJQ9NTG1 2253 aa13.29□□□□□ -0.28
TRAPPC6B-206ENST00000556765 A0A087WV62 115 aa13.28□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PGRMC2O15173 223 aa13.28□□□□□ -0.28
TRAPPC6B-206ENST00000556765 DENRO43583 198 aaKnown RBP13.28□□□□□ -0.28
TRAPPC6B-206ENST00000556765 RASAL1O95294 804 aa13.28□□□□□ -0.28
TRAPPC6B-206ENST00000556765 CST1P01037 141 aa13.28□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ATP1B1P05026 303 aa13.28□□□□□ -0.28
TRAPPC6B-206ENST00000556765 FABP3P05413 133 aa13.28□□□□□ -0.28
TRAPPC6B-206ENST00000556765 RNH1P13489 461 aaKnown RBP13.28□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PORP16435 677 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ZNF26P17031 533 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC6B-206ENST00000556765 CDK9P50750 372 aaKnown RBP13.28□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ARHGDIAP52565 204 aa13.28□□□□□ -0.28
TRAPPC6B-206ENST00000556765 AQP4P55087 323 aa13.28□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PER3P56645 1201 aa13.28□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PCBP3P57721 371 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms