RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 C19orf53Q9UNZ5 99 aaPredicted RBP17.11■□□□□ 0.33
SDR39U1-220ENST00000556548 LIPT1Q9Y234 373 aa17.11■□□□□ 0.33
SDR39U1-220ENST00000556548 SLC9A8Q9Y2E8 581 aa17.11■□□□□ 0.33
SDR39U1-220ENST00000556548 TMEM131Q92545 1883 aa17.11■□□□□ 0.33
SDR39U1-220ENST00000556548 TLCD2A6NGC4 264 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 DUXAA6NLW8 204 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 A8MU76 341 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 AGRPO00253 132 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 OR10H3O60404 316 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 UGT2B17O75795 530 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 CBLP22681 906 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 POU1F1P28069 291 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 AVPR1BP47901 424 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 IDH2P48735 452 aaKnown RBP17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 LSM11P83369 360 aaKnown RBP eCLIP17.1■□□□□ 0.334e-7■□□□□ 9
SDR39U1-220ENST00000556548 RAB39AQ14964 217 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 MAD2L1BPQ15013 274 aaPredicted RBP17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 DCST1Q5T197 706 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 CLVS1Q8IUQ0 354 aaPredicted RBP17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 ENTHD1Q8IYW4 607 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 FBLIM1Q8WUP2 373 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 PLCL2Q9UPR0 1127 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 TMEM184BQ9Y519 407 aaPredicted RBP17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 MAU2Q9Y6X3 613 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 TGFBR3LH3BV60 316 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 GABRA4P48169 554 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 BTG2P78543 158 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 MGAT2Q10469 447 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 GPR68Q15743 365 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 NPTX1Q15818 432 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 ZNF770Q6IQ21 691 aaPredicted RBP17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 ZC3H14Q6PJT7 736 aaKnown RBP17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 KLHL17Q6TDP4 642 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 FRRS1Q6ZNA5 592 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 SPARTQ8N0X7 666 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 CLIP4Q8N3C7 705 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 OR52P1PQ8NH57 321 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 MAFAQ8NHW3 353 aaPredicted RBP17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 SLC7A13Q8TCU3 470 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 ZDHHC12Q96GR4 267 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 HRASLS5Q96KN8 279 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 FNDC11Q9BVV2 318 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 PINK1Q9BXM7 581 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 LIN28AQ9H9Z2 209 aaKnown RBP17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 FBXO34Q9NWN3 711 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 RNF6Q9Y252 685 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 CHST2Q9Y4C5 530 aa17.1■□□□□ 0.33
SDR39U1-220ENST00000556548 CENPVL1A0A0U1RR11 272 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 IGFBP1P08833 259 aaPredicted RBP17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 NDUFA9Q16795 377 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 HEPHL1Q6MZM0 1159 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 NCCRP1Q6ZVX7 275 aaPredicted RBP17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 GATAD2AQ86YP4 633 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 PITX2Q99697 317 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 PRDM9Q9NQV7 894 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 SLC13A4Q9UKG4 626 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 SLC6A14Q9UN76 642 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 CDC14AQ9UNH5 594 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 WDR45Q9Y484 360 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 CABIN1Q9Y6J0 2220 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 NPIPA5A0A0B4J1W7 369 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 NPIPA7E9PJI5 369 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 ABCB7O75027 752 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 NTN1O95631 604 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 NPIPA8P0DM63 369 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 RFX3P48380 749 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 MAPK10P53779 464 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 BNC1Q01954 994 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 CFHR1Q03591 330 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 ZBED5Q49AG3 693 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 PRAMEF17Q5VTA0 474 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 MEX3DQ86XN8 651 aaKnown RBP17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 GPR151Q8TDV0 419 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 CXorf21Q9HAI6 301 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 CALML5Q9NZT1 146 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 ERVK-18Q9QC07 812 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 RSL24D1Q9UHA3 163 aaKnown RBP17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 NTNG1Q9Y2I2 539 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 DSPPQ9NZW4 1301 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 ASXL3Q9C0F0 2248 aa17.09■□□□□ 0.33
SDR39U1-220ENST00000556548 IGHV1OR21-1A0A087WYE8 117 aa17.08■□□□□ 0.33
SDR39U1-220ENST00000556548 HRKO00198 91 aa17.08■□□□□ 0.33
SDR39U1-220ENST00000556548 SOX14O95416 240 aa17.08■□□□□ 0.33
SDR39U1-220ENST00000556548 RNH1P13489 461 aaKnown RBP17.08■□□□□ 0.33
SDR39U1-220ENST00000556548 CD97P48960 835 aa17.08■□□□□ 0.33
SDR39U1-220ENST00000556548 STX4Q12846 297 aa17.08■□□□□ 0.33
SDR39U1-220ENST00000556548 TOP3AQ13472 1001 aaPredicted RBP17.08■□□□□ 0.33
SDR39U1-220ENST00000556548 GPR107Q5VW38 600 aa17.08■□□□□ 0.33
SDR39U1-220ENST00000556548 XAF1Q6GPH4 301 aa17.08■□□□□ 0.33
SDR39U1-220ENST00000556548 TYW3Q6IPR3 259 aaKnown RBP17.08■□□□□ 0.33
SDR39U1-220ENST00000556548 PODNL1Q6PEZ8 512 aa17.08■□□□□ 0.33
SDR39U1-220ENST00000556548 BORAQ6PGQ7 559 aa17.08■□□□□ 0.33
SDR39U1-220ENST00000556548 FIGNL1Q6PIW4 674 aa17.08■□□□□ 0.33
SDR39U1-220ENST00000556548 B3GNT6Q6ZMB0 384 aa17.08■□□□□ 0.33
SDR39U1-220ENST00000556548 OR52R1Q8NGF1 315 aa17.08■□□□□ 0.33
SDR39U1-220ENST00000556548 APH1BQ8WW43 257 aa17.08■□□□□ 0.33
SDR39U1-220ENST00000556548 SDF2Q99470 211 aa17.08■□□□□ 0.33
SDR39U1-220ENST00000556548 TIMMDC1Q9NPL8 285 aa17.08■□□□□ 0.33
SDR39U1-220ENST00000556548 CPSF4LA6NMK7 179 aaKnown RBP17.08■□□□□ 0.32
SDR39U1-220ENST00000556548 PLOD3O60568 738 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms