RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 RAF1P04049 648 aa17.1■□□□□ 0.33
CDKN3-209ENST00000556102 IL3P08700 152 aa17.1■□□□□ 0.33
CDKN3-209ENST00000556102 DRD2P14416 443 aa17.1■□□□□ 0.33
CDKN3-209ENST00000556102 TAC1P20366 129 aa17.1■□□□□ 0.33
CDKN3-209ENST00000556102 SRD5A2P31213 254 aa17.1■□□□□ 0.33
CDKN3-209ENST00000556102 GFRA1P56159 465 aa17.1■□□□□ 0.33
CDKN3-209ENST00000556102 SRYQ05066 204 aa17.1■□□□□ 0.33
CDKN3-209ENST00000556102 FOXF2Q12947 444 aa17.1■□□□□ 0.33
CDKN3-209ENST00000556102 FOXD4Q12950 439 aaPredicted RBP17.1■□□□□ 0.33
CDKN3-209ENST00000556102 SCIMPQ6UWF3 145 aa17.1■□□□□ 0.33
CDKN3-209ENST00000556102 IFNEQ86WN2 208 aa17.1■□□□□ 0.33
CDKN3-209ENST00000556102 CCDC116Q8IYX3 515 aa17.1■□□□□ 0.33
CDKN3-209ENST00000556102 SAMD14Q8IZD0 417 aaPredicted RBP17.1■□□□□ 0.33
CDKN3-209ENST00000556102 UHMK1Q8TAS1 419 aaKnown RBP17.1■□□□□ 0.33
CDKN3-209ENST00000556102 IFT81Q8WYA0 676 aa17.1■□□□□ 0.33
CDKN3-209ENST00000556102 WNT2BQ93097 391 aa17.1■□□□□ 0.33
CDKN3-209ENST00000556102 ZNF382Q96SR6 550 aa17.1■□□□□ 0.33
CDKN3-209ENST00000556102 RBM24Q9BX46 236 aaKnown RBP17.1■□□□□ 0.33
CDKN3-209ENST00000556102 TAS2R10Q9NYW0 307 aa17.1■□□□□ 0.33
CDKN3-209ENST00000556102 DLGAP4Q9Y2H0 992 aa17.1■□□□□ 0.33
CDKN3-209ENST00000556102 WIF1Q9Y5W5 379 aa17.1■□□□□ 0.33
CDKN3-209ENST00000556102 NIPBLQ6KC79 2804 aaeCLIP17.09■□□□□ 0.33
CDKN3-209ENST00000556102 CLCA1A8K7I4 914 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 PCDH7O60245 1069 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 TSPAN2O60636 221 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 CT45A8P0DMV1 189 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 CT45A9P0DMV2 189 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 CHN1P15882 459 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 ECHS1P30084 290 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 PSPHP78330 225 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 EFR3AQ14156 821 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 ERCC6LQ2NKX8 1250 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 UNC50Q53HI1 259 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 CT45A2Q5DJT8 189 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 ZNF678Q5SXM1 525 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 AAGABQ6PD74 315 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 GPRIN3Q6ZVF9 776 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 GBP7Q8N8V2 638 aaPredicted RBP17.09■□□□□ 0.33
CDKN3-209ENST00000556102 OR9A2Q8NGT5 310 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 VSTM2LQ96N03 204 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 TMEM237Q96Q45 408 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 ADOQ96SZ5 270 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 YIPF4Q9BSR8 244 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 G6PC3Q9BUM1 346 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 ACBD3Q9H3P7 528 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 ANKRA2Q9H9E1 313 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 GIMAP4Q9NUV9 329 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 CLCF1Q9UBD9 225 aa17.09■□□□□ 0.33
CDKN3-209ENST00000556102 EXOC1LA0A1B0GW35 172 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 GNG14A0A1W2PPG7 69 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 ULK1O75385 1050 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 ATE1O95260 518 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 CHMP24386 653 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 HMOX2P30519 316 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 KRT20P35900 424 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 CPA2P48052 419 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 LHX2P50458 406 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 CORO7P57737 925 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 RAE1P78406 368 aaKnown RBP17.08■□□□□ 0.32
CDKN3-209ENST00000556102 ACSM2AQ08AH3 577 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 SPIN4Q56A73 249 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 LGSNQ5TDP6 509 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 ACSM2BQ68CK6 577 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 TIFABQ6ZNK6 161 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 LUZP2Q86TE4 346 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 NOA1Q8NC60 698 aaKnown RBP17.08■□□□□ 0.32
CDKN3-209ENST00000556102 METTL6Q8TCB7 284 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 KAT2AQ92830 837 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 EXOSC8Q96B26 276 aaKnown RBP17.08■□□□□ 0.32
CDKN3-209ENST00000556102 INTS12Q96CB8 462 aaKnown RBP17.08■□□□□ 0.32
CDKN3-209ENST00000556102 SFXN2Q96NB2 322 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 ACPTQ9BZG2 426 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 PLEKHF2Q9H8W4 249 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 DLL4Q9NR61 685 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 GALNT8Q9NY28 637 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 FBXL2Q9UKC9 423 aa17.08■□□□□ 0.32
CDKN3-209ENST00000556102 MRPS18CQ9Y3D5 142 aaKnown RBP17.08■□□□□ 0.32
CDKN3-209ENST00000556102 PLOD2O00469 737 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 DLX3O60479 287 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 ZNF708P17019 499 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 IL12BP29460 328 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 STARP49675 285 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 HTR6P50406 440 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 EEF1A1P68104 462 aaKnown RBP17.07■□□□□ 0.32
CDKN3-209ENST00000556102 ADAM8P78325 824 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 GAB1Q13480 694 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 KEAP1Q14145 624 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 HEPACAMQ14CZ8 416 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 DEFB113Q30KQ7 82 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 EEF1A1P5Q5VTE0 462 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 PLXDC2Q6UX71 529 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 NPSR1Q6W5P4 371 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 LARP4Q71RC2 724 aaKnown RBP eCLIP17.07■□□□□ 0.32
CDKN3-209ENST00000556102 LCA5Q86VQ0 697 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 GCNT2Q8N0V5 402 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 C16orf78Q8WTQ4 265 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 RNF138Q8WVD3 245 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 MTBPQ96DY7 904 aa17.07■□□□□ 0.32
CDKN3-209ENST00000556102 C16orf45Q96MC5 204 aaPredicted RBP17.07■□□□□ 0.32
CDKN3-209ENST00000556102 DACH2Q96NX9 599 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms