RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 TRIM25Q14258 630 aaKnown RBP10.24□□□□□ -0.77
TMEM260-208ENST00000555905 ADRM1Q16186 407 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 DUSP5Q16690 384 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 VMACQ2NL98 169 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 BTBD16Q32M84 506 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 INTS11Q5TA45 600 aaKnown RBP10.24□□□□□ -0.77
TMEM260-208ENST00000555905 C1orf146Q5VVC0 180 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 PLAG1Q6DJT9 500 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 WDR53Q7Z5U6 358 aaPredicted RBP10.24□□□□□ -0.77
TMEM260-208ENST00000555905 MRGPREQ86SM8 312 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 VASH2Q86V25 355 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 PROSER1Q86XN7 944 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 PTOV1Q86YD1 416 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 ZZZ3Q8IYH5 903 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 METTL25Q8N6Q8 603 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 COX18Q8N8Q8 333 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 SLC16A11Q8NCK7 471 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 APCDD1LQ8NCL9 501 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 M1APQ8TC57 530 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 CDS1Q92903 461 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 MAL2Q969L2 176 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 ASB9Q96DX5 294 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 OTUB1Q96FW1 271 aaPredicted RBP10.24□□□□□ -0.77
TMEM260-208ENST00000555905 SLC35A4Q96G79 324 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 BTBD9Q96Q07 612 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 GAL3ST4Q96RP7 486 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 BTBD2Q9BX70 525 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 TRIM15Q9C019 465 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 ZNF160Q9HCG1 818 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 Q9N2J8 555 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 P4HTMQ9NXG6 502 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 CALML5Q9NZT1 146 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 GMPR2Q9P2T1 348 aaKnown RBP10.24□□□□□ -0.77
TMEM260-208ENST00000555905 EGFL7Q9UHF1 273 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 MAGEL2Q9UJ55 1249 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 FBXL4Q9UKA2 621 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 ANGPT4Q9Y264 503 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 ZNF451Q9Y4E5 1061 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 SNX13Q9Y5W8 968 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 AHCTF1Q8WYP5 2266 aa10.24□□□□□ -0.77
TMEM260-208ENST00000555905 FRG2CA6NGY1 282 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 CXCR6O00574 342 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 ZFAND5O76080 213 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 SORBS2O94875 1100 aaKnown RBP10.23□□□□□ -0.77
TMEM260-208ENST00000555905 NKX2-2O95096 273 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 AK1P00568 194 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 GGT1P19440 569 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 DRD5P21918 477 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 MAP3K8P41279 467 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 PPICP45877 212 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 CORO7P57737 925 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 AP2B1P63010 937 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 RNF4P78317 190 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 PSPHP78330 225 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 POU6F2P78424 691 aaPredicted RBP10.23□□□□□ -0.77
TMEM260-208ENST00000555905 HPCAP84074 193 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 CLN3Q13286 438 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 VEZF1Q14119 521 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 FLOT2Q14254 428 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 EBPQ15125 230 aaKnown RBP10.23□□□□□ -0.77
TMEM260-208ENST00000555905 GPAT3Q53EU6 434 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 EXOSC6Q5RKV6 272 aaKnown RBP10.23□□□□□ -0.77
TMEM260-208ENST00000555905 REEP3Q6NUK4 255 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 DHFR2Q86XF0 187 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 PTRH1Q86Y79 214 aaKnown RBP10.23□□□□□ -0.77
TMEM260-208ENST00000555905 SLC44A2Q8IWA5 706 aaPredicted RBP10.23□□□□□ -0.77
TMEM260-208ENST00000555905 C9orf40Q8IXQ3 194 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 ZNF248Q8NDW4 579 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 HIPK4Q8NE63 616 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 C17orf47Q8NEP4 570 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 OR5L2Q8NGL0 311 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 OR8K3Q8NH51 312 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 NFKBIDQ8NI38 313 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 SLC38A5Q8WUX1 472 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 KCNE4Q8WWG9 221 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 FIG4Q92562 907 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 HOXB13Q92826 284 aaPredicted RBP10.23□□□□□ -0.77
TMEM260-208ENST00000555905 LCORQ96JN0 433 aaPredicted RBP10.23□□□□□ -0.77
TMEM260-208ENST00000555905 IMMP1LQ96LU5 166 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 LRGUKQ96M69 825 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 TRNT1Q96Q11 434 aaKnown RBP10.23□□□□□ -0.77
TMEM260-208ENST00000555905 ITPAQ9BY32 194 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 WWTR1Q9GZV5 400 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 PCDHAC1Q9H158 963 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 MMP25Q9NPA2 562 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 ACTR3BQ9P1U1 418 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 USP22Q9UPT9 525 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 POMPQ9Y244 141 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 DTX4Q9Y2E6 619 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 GPR55Q9Y2T6 319 aaPredicted RBP10.23□□□□□ -0.77
TMEM260-208ENST00000555905 OR10H1Q9Y4A9 318 aa10.23□□□□□ -0.77
TMEM260-208ENST00000555905 CDC14CA4D256 554 aa10.22□□□□□ -0.77
TMEM260-208ENST00000555905 A8MVJ9 347 aa10.22□□□□□ -0.77
TMEM260-208ENST00000555905 ARPC2O15144 300 aa10.22□□□□□ -0.77
TMEM260-208ENST00000555905 ACOX3O15254 700 aa10.22□□□□□ -0.77
TMEM260-208ENST00000555905 BCHEP06276 602 aa10.22□□□□□ -0.77
TMEM260-208ENST00000555905 TFPTP0C1Z6 253 aa10.22□□□□□ -0.77
TMEM260-208ENST00000555905 CT45A8P0DMV1 189 aa10.22□□□□□ -0.77
TMEM260-208ENST00000555905 CT45A9P0DMV2 189 aa10.22□□□□□ -0.77
TMEM260-208ENST00000555905 TRHRP34981 398 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms