RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 PHPT1Q9NRX4 125 aaPredicted RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 MAN2C1Q9NTJ4 1040 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 TESQ9UGI8 421 aaKnown RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 LIPT1Q9Y234 373 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 PCYT1BQ9Y5K3 369 aaPredicted RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 LINC00854A0A1B0GVQ3 168 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 A0A1W2PQL4 384 aaPredicted RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 PRAMEF27A3QJZ7 478 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 GSAPA4D1B5 854 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 FAM172BPA6NC97 362 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 A8MU76 341 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 PLD2O14939 933 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 EMC8O43402 210 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 CHST10O43529 356 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 SSX4O60224 188 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 LCMT2O60294 686 aaKnown RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 CHRM4P08173 479 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 POU2F2P09086 479 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 TRAPPC2P0DI81 140 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 TRAPPC2BP0DI82 140 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 EN2P19622 333 aaPredicted RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 CSNK2A2P19784 350 aaPredicted RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 HIST1H1TP22492 207 aaPredicted RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 RPS5P46782 204 aaKnown RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 ARFIP1P53367 373 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 PPP3R1P63098 170 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 ABATP80404 500 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 ST3GAL3Q11203 375 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 TSPAN31Q12999 210 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 TPBGQ13641 420 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 WSCD2Q2TBF2 565 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 PYDC2Q56P42 97 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 ATAD3CQ5T2N8 411 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 PIP5KL1Q5T9C9 394 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 TYW3Q6IPR3 259 aaKnown RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 KIAA1161Q6NSJ0 714 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 ACSM5Q6NUN0 579 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 TMEM107Q6UX40 140 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 ZNF793Q6ZN11 406 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 WDR53Q7Z5U6 358 aaPredicted RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 ACOT4Q8N9L9 421 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 OR2L5Q8NG80 312 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 OR2L8Q8NGY9 312 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 SPPL3Q8TCT6 385 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 SMG7Q92540 1137 aaKnown RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 KIAA1143Q96AT1 154 aaPredicted RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 RSPRY1Q96DX4 576 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 TRMT61AQ96FX7 289 aaKnown RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 MSLNLQ96KJ4 702 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 SNX18Q96RF0 628 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 NRTNQ99748 197 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 COQ7Q99807 217 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 WFDC6Q9BQY6 131 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 RSPO3Q9BXY4 272 aaPredicted RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 TEX101Q9BY14 249 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 SAP130Q9H0E3 1048 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 ANKRD19PQ9H560 264 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 TIGARQ9NQ88 270 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 PRSS16Q9NQE7 514 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 CTPS2Q9NRF8 586 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 MRPS18AQ9NVS2 196 aaKnown RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 CXXC1Q9P0U4 656 aaPredicted RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 MUTYHQ9UIF7 546 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 ZNF780BQ9Y6R6 833 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 CENPXA8MT69 81 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 AP3D1O14617 1153 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 RGS13O14921 159 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 CASKO14936 926 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 TFECO14948 347 aaPredicted RBP6.57□□□□□ -1.36
TDP1-213ENST00000555880 AKAP8O43823 692 aaKnown RBP6.57□□□□□ -1.36
TDP1-213ENST00000555880 AIFM1O95831 613 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 ATP5A1P25705 553 aaKnown RBP6.57□□□□□ -1.36
TDP1-213ENST00000555880 PKLRP30613 574 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 AHRP35869 848 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 ATP6V1E1P36543 226 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 DDOSTP39656 456 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 BCL6P41182 706 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 TSFMP43897 325 aaKnown RBP6.57□□□□□ -1.36
TDP1-213ENST00000555880 CDH11P55287 796 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 RGS8P57771 180 aaPredicted RBP6.57□□□□□ -1.36
TDP1-213ENST00000555880 STXBP1P61764 594 aaKnown RBP6.57□□□□□ -1.36
TDP1-213ENST00000555880 DMPKQ09013 629 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 PDGFRLQ15198 375 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 SF3B4Q15427 424 aaKnown RBP eCLIP6.57□□□□□ -1.362e-7■■■■■ 32.9
TDP1-213ENST00000555880 TAB1Q15750 504 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 ZNF79Q15937 498 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 BAK1Q16611 211 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 ZMAT1Q5H9K5 638 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 FAM78AQ5JUQ0 283 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 LCN1P1Q5VSP4 162 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 TRIQKQ629K1 86 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 QSOX2Q6ZRP7 698 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 RASSF6Q6ZTQ3 369 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 PLEKHM3Q6ZWE6 761 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 HMGN2P46Q86SG4 172 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 C11orf74Q86VG3 221 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 COMTD1Q86VU5 262 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 CACUL1Q86Y37 369 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 KIF18BQ86Y91 864 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 GATAD2AQ86YP4 633 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms