RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 CT45A9P0DMV2 189 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 TACR1P25103 407 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 RPL38P63173 70 aaKnown RBP16.82■□□□□ 0.28
NEDD1-208ENST00000555806 SNTA1Q13424 505 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 EFR3AQ14156 821 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 KIAA0040Q15053 153 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 GALNTL6Q49A17 601 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 CT45A2Q5DJT8 189 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 SH2D4BQ5SQS7 431 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 MEX3BQ6ZN04 569 aaKnown RBP16.82■□□□□ 0.28
NEDD1-208ENST00000555806 ZCCHC23Q6ZST2 131 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 OR2T11Q8NH01 316 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 AGR3Q8TD06 166 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 TWIST2Q8WVJ9 160 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 EGLN2Q96KS0 407 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 ADOQ96SZ5 270 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 TUBB1Q9H4B7 451 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 KCNJ16Q9NPI9 418 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 DDX18Q9NVP1 670 aaKnown RBP16.82■□□□□ 0.28
NEDD1-208ENST00000555806 TAS2R7Q9NYW3 318 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 EXO1Q9UQ84 846 aaKnown RBP16.82■□□□□ 0.28
NEDD1-208ENST00000555806 SLC6A5Q9Y345 797 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 DNAJC15Q9Y5T4 150 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 A0A087WV62 115 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 TMEM233B4DJY2 109 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 NPIPB8E9PQR5 432 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 SLITRK5O94991 958 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 PTPN6P29350 595 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 PTGDSP41222 190 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 ZFP36L2P47974 494 aaKnown RBP16.81■□□□□ 0.28
NEDD1-208ENST00000555806 PSPHP78330 225 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 CRYZQ08257 329 aaKnown RBP16.81■□□□□ 0.28
NEDD1-208ENST00000555806 KRT71Q3SY84 523 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 EIPR1Q53HC9 387 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 ARL13AQ5H913 290 aaPredicted RBP16.81■□□□□ 0.28
NEDD1-208ENST00000555806 WIPI1Q5MNZ9 446 aaPredicted RBP16.81■□□□□ 0.28
NEDD1-208ENST00000555806 RNF165Q6ZSG1 346 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 Q6ZSR9 355 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 LARP4Q71RC2 724 aaKnown RBP eCLIP16.81■□□□□ 0.28
NEDD1-208ENST00000555806 HOMEZQ8IX15 550 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 ULK2Q8IYT8 1036 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 CLYBLQ8N0X4 340 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 SLC35A4Q96G79 324 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 AMDHD1Q96NU7 426 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 TSSK3Q96PN8 268 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 CCT7Q99832 543 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 SERHLQ9NQF3 203 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 C19orf53Q9UNZ5 99 aaPredicted RBP16.81■□□□□ 0.28
NEDD1-208ENST00000555806 CAMK2AQ9UQM7 478 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 TRAF6Q9Y4K3 522 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 PCDHGB3Q9Y5G1 929 aa16.81■□□□□ 0.28
NEDD1-208ENST00000555806 A0A0G2JNJ9 132 aa16.8■□□□□ 0.28
NEDD1-208ENST00000555806 PDPK1O15530 556 aa16.8■□□□□ 0.28
NEDD1-208ENST00000555806 AKAP10O43572 662 aa16.8■□□□□ 0.28
NEDD1-208ENST00000555806 TSPAN2O60636 221 aa16.8■□□□□ 0.28
NEDD1-208ENST00000555806 CREB1P16220 341 aa16.8■□□□□ 0.28
NEDD1-208ENST00000555806 SDC1P18827 310 aa16.8■□□□□ 0.28
NEDD1-208ENST00000555806 GCKP35557 465 aa16.8■□□□□ 0.28
NEDD1-208ENST00000555806 ADH7P40394 386 aa16.8■□□□□ 0.28
NEDD1-208ENST00000555806 MRPS22P82650 360 aaKnown RBP16.8■□□□□ 0.28
NEDD1-208ENST00000555806 ANKRD26P1Q6NSI1 321 aa16.8■□□□□ 0.28
NEDD1-208ENST00000555806 YRDCQ86U90 279 aaKnown RBP16.8■□□□□ 0.28
NEDD1-208ENST00000555806 MREGQ8N565 214 aa16.8■□□□□ 0.28
NEDD1-208ENST00000555806 FAM83FQ8NEG4 500 aaPredicted RBP16.8■□□□□ 0.28
NEDD1-208ENST00000555806 OR4N2Q8NGD1 307 aa16.8■□□□□ 0.28
NEDD1-208ENST00000555806 CLHC1Q8NHS4 586 aa16.8■□□□□ 0.28
NEDD1-208ENST00000555806 EFHD2Q96C19 240 aaPredicted RBP16.8■□□□□ 0.28
NEDD1-208ENST00000555806 NTNG2Q96CW9 530 aa16.8■□□□□ 0.28
NEDD1-208ENST00000555806 TIMP4Q99727 224 aa16.8■□□□□ 0.28
NEDD1-208ENST00000555806 SPOCK3Q9BQ16 436 aa16.8■□□□□ 0.28
NEDD1-208ENST00000555806 PARD6BQ9BYG5 372 aa16.8■□□□□ 0.28
NEDD1-208ENST00000555806 TRIM8Q9BZR9 551 aa16.8■□□□□ 0.28
NEDD1-208ENST00000555806 Q9UFV3 132 aa16.8■□□□□ 0.28
NEDD1-208ENST00000555806 FREM3P0C091 2139 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 PKDREJQ9NTG1 2253 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 FAM47E-STBD1D6RA91 191 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 UPK1AO00322 258 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 PLOD2O00469 737 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 PIP5K1BO14986 540 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 LSM1O15116 133 aaKnown RBP16.79■□□□□ 0.28
NEDD1-208ENST00000555806 FGF4P08620 206 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 GPC1P35052 558 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 PSG6Q00889 435 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 HSPB3Q12988 150 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 ZNHIT3Q15649 155 aaPredicted RBP16.79■□□□□ 0.28
NEDD1-208ENST00000555806 RFTN2Q52LD8 501 aaPredicted RBP16.79■□□□□ 0.28
NEDD1-208ENST00000555806 PM20D2Q8IYS1 436 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 PPCDCQ96CD2 204 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 ELP4Q96EB1 424 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 FCRL1Q96LA6 429 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 TMEM109Q9BVC6 243 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 UGT2B28Q9BY64 529 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 ENKD1Q9H0I2 346 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 REEP4Q9H6H4 257 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 SH3BP4Q9P0V3 963 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 TMED5Q9Y3A6 229 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 WIF1Q9Y5W5 379 aa16.79■□□□□ 0.28
NEDD1-208ENST00000555806 AHRRA9YTQ3 701 aa16.78■□□□□ 0.28
NEDD1-208ENST00000555806 RGS16O15492 202 aaPredicted RBP16.78■□□□□ 0.28
NEDD1-208ENST00000555806 CBR3O75828 277 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms