RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 Q9H3A6 140 aa2.44□□□□□ -2.02
SCFD1-216ENST00000555550 PTGES2Q9H7Z7 377 aa2.44□□□□□ -2.02
SCFD1-216ENST00000555550 PNPLA3Q9NST1 481 aa2.44□□□□□ -2.02
SCFD1-216ENST00000555550 AKAP7Q9P0M2 348 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-216ENST00000555550 BARX2Q9UMQ3 279 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-216ENST00000555550 NEU3Q9UQ49 428 aa2.44□□□□□ -2.02
SCFD1-216ENST00000555550 ZNF175Q9Y473 711 aa2.44□□□□□ -2.02
SCFD1-216ENST00000555550 RSPH10B2B2RC85 870 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 APRTP07741 180 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 RSPH10BP0C881 870 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 SDC1P18827 310 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 MAT2AP31153 395 aaKnown RBP2.43□□□□□ -2.02
SCFD1-216ENST00000555550 NF2P35240 595 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 POU3F4P49335 361 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 NME5P56597 212 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 ZNF45Q02386 682 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 IL17AQ16552 155 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 CAMK4Q16566 473 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 ZNF528Q3MIS6 628 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 SBK1Q52WX2 424 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 HECTD3Q5T447 861 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 RANBP3LQ86VV4 465 aaPredicted RBP2.43□□□□□ -2.02
SCFD1-216ENST00000555550 SLC22A16Q86VW1 577 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 OR10H4Q8NGA5 316 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 JAKMIP1Q96N16 626 aaKnown RBP2.43□□□□□ -2.02
SCFD1-216ENST00000555550 GPR137Q96N19 417 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 FAM213AQ9BRX8 229 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 CNPY3Q9BT09 278 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 NLNQ9BYT8 704 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 SLC5A7Q9GZV3 580 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 GLT8D2Q9H1C3 349 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 ABCG8Q9H221 673 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 CARD9Q9H257 536 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 MMADHCQ9H3L0 296 aaPredicted RBP2.43□□□□□ -2.02
SCFD1-216ENST00000555550 ALG9Q9H6U8 611 aa2.43□□□□□ -2.02
SCFD1-216ENST00000555550 TRBV7-9A0A0J9YWB2 115 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 LRIT2A6NDA9 550 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 B4DXG7 233 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-216ENST00000555550 HTATSF1O43719 755 aaKnown RBP2.42□□□□□ -2.02
SCFD1-216ENST00000555550 SDC3O75056 442 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 CA11O75493 328 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 GPX5O75715 221 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 IGSF6O95976 241 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 CYP11B1P15538 503 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 RBMXP38159 391 aaKnown RBP2.42□□□□□ -2.02
SCFD1-216ENST00000555550 NPY2RP49146 381 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 CAV2P51636 162 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 EFNA3P52797 238 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 AARDQ4LEZ3 155 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 GLRA4Q5JXX5 417 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 Q6P435 159 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 C9orf40Q8IXQ3 194 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 CENPSQ8N2Z9 138 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 TMCO5AQ8N6Q1 288 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 LPCAT1Q8NF37 534 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 ANKRD49Q8WVL7 239 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 TMEM37Q8WXS4 190 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 FAM104AQ969W3 186 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 C11orf24Q96F05 449 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-216ENST00000555550 DEFB118Q96PH6 123 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 TSPAN18Q96SJ8 248 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 TM2D1Q9BX74 207 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 NANOGQ9H9S0 305 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 KCNMB3Q9NPA1 279 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 ELOVL2Q9NXB9 296 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 TRMT6Q9UJA5 497 aaKnown RBP2.42□□□□□ -2.02
SCFD1-216ENST00000555550 PURGQ9UJV8 347 aaKnown RBP2.42□□□□□ -2.02
SCFD1-216ENST00000555550 KLK12Q9UKR0 248 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 DHRS7Q9Y394 339 aa2.42□□□□□ -2.02
SCFD1-216ENST00000555550 IGKV6-21A0A0C4DH24 114 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 A0A0U1RQG5 324 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-216ENST00000555550 C5orf51A6NDU8 294 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 PDLIM1O00151 329 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 ARPC1BO15143 372 aaKnown RBP2.41□□□□□ -2.02
SCFD1-216ENST00000555550 DFNA5O60443 496 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 RTN2O75298 545 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 ZNF18P17022 549 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 GABRR1P24046 479 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 TNNT3P45378 269 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-216ENST00000555550 NLRP11P59045 1033 aaKnown RBP2.41□□□□□ -2.02
SCFD1-216ENST00000555550 RPL32P62910 135 aaKnown RBP2.41□□□□□ -2.02
SCFD1-216ENST00000555550 GALK2Q01415 458 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 LRRC63Q05C16 580 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 BTG3Q14201 252 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-216ENST00000555550 PRR4Q16378 134 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 SGCBQ16585 318 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 CMPK2Q5EBM0 449 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 IRGCQ6NXR0 463 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 TMEM270Q6UE05 265 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 DPY19L2P2Q6ZN68 376 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 TRPM8Q7Z2W7 1104 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 BNIPLQ7Z465 357 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 LINC01555Q8NAE3 123 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 DLX4Q92988 240 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-216ENST00000555550 FUT8Q9BYC5 575 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 TRPV6Q9H1D0 765 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 IL1RAPL2Q9NP60 686 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 LHX3Q9UBR4 397 aa2.41□□□□□ -2.02
SCFD1-216ENST00000555550 COPS7AQ9UBW8 275 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms