RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 SPRR3Q9UBC9 169 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 TRGV5A0A0B4J1U4 118 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 TMEM114B3SHH9 223 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 AQP7O14520 342 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 SUSD5O60279 629 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 COQ9O75208 318 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 ERLIN1O75477 346 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 REM1O75628 298 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 SNX4O95219 450 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 GDF1P27539 372 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 MAN2A2P49641 1150 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 ABCE1P61221 599 aaKnown RBP18.76■□□□□ 0.59
VTI1B-205ENST00000555543 RPP38P78345 283 aaKnown RBP18.76■□□□□ 0.59
VTI1B-205ENST00000555543 ATP6AP1LQ52LC2 224 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 C6orf136Q5SQH8 315 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 TMEM81Q6P7N7 255 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 WDR53Q7Z5U6 358 aaPredicted RBP18.76■□□□□ 0.59
VTI1B-205ENST00000555543 SLC44A2Q8IWA5 706 aaPredicted RBP18.76■□□□□ 0.59
VTI1B-205ENST00000555543 LIX1Q8N485 282 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 PHF10Q8WUB8 498 aaKnown RBP18.76■□□□□ 0.59
VTI1B-205ENST00000555543 SLC35A4Q96G79 324 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 COL21A1Q96P44 957 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 GNRHR2Q96P88 292 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 SORT1Q99523 831 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 OSBPL11Q9BXB4 747 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 UBQLN3Q9H347 655 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 LDAHQ9H6V9 325 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 QPCTLQ9NXS2 382 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 B4GALT7Q9UBV7 327 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 C15orf41Q9Y2V0 281 aa18.76■□□□□ 0.59
VTI1B-205ENST00000555543 C2orf72A6NCS6 295 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 OR14I1A6ND48 311 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 OR6C70A6NIJ9 312 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 GNB5O14775 395 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 TSPAN2O60636 221 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 HCN1O60741 890 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 MYZAPP0CAP1 466 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 EFNA1P20827 205 aaPredicted RBP18.75■□□□□ 0.59
VTI1B-205ENST00000555543 GRNP28799 593 aaKnown RBP18.75■□□□□ 0.59
VTI1B-205ENST00000555543 FRKP42685 505 aaPredicted RBP18.75■□□□□ 0.59
VTI1B-205ENST00000555543 ASMTP46597 345 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 MASP1P48740 699 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 TRPC1P48995 793 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 ART3Q13508 389 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 PTGR1Q14914 329 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 PDCD2Q16342 344 aaPredicted RBP18.75■□□□□ 0.59
VTI1B-205ENST00000555543 GXYLT1Q4G148 440 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 PACS2Q86VP3 889 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 ANKRD42Q8N9B4 389 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 NUDT8Q8WV74 236 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 TMEM41AQ96HV5 264 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 ADOQ96SZ5 270 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 TP63Q9H3D4 680 aaPredicted RBP18.75■□□□□ 0.59
VTI1B-205ENST00000555543 ACKR4Q9NPB9 350 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 SH3BP4Q9P0V3 963 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 ITPR2Q14571 2701 aa18.75■□□□□ 0.59
VTI1B-205ENST00000555543 PRAMEF25A6NGN4 478 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 PRSS44E7EML9 344 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 SCAMP2O15127 329 aaKnown RBP18.74■□□□□ 0.59
VTI1B-205ENST00000555543 ICOSLGO75144 302 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 MAPK1P28482 360 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 SLC1A6P48664 564 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 CDK9P50750 372 aaKnown RBP18.74■□□□□ 0.59
VTI1B-205ENST00000555543 SMSP52788 366 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 WDR4P57081 412 aaKnown RBP18.74■□□□□ 0.59
VTI1B-205ENST00000555543 IL23RQ5VWK5 629 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 TIGD3Q6B0B8 471 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 XKRXQ6PP77 449 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 ANGPTL8Q6UXH0 198 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 LARP4Q71RC2 724 aaKnown RBP eCLIP18.74■□□□□ 0.59
VTI1B-205ENST00000555543 FNDC5Q8NAU1 212 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 OR7A2PQ8NGA2 310 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 NEIL3Q8TAT5 605 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 EFHD2Q96C19 240 aaPredicted RBP18.74■□□□□ 0.59
VTI1B-205ENST00000555543 TUBGCP3Q96CW5 907 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 MTERF3Q96E29 417 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 PPP1R36Q96LQ0 422 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 EXO5Q9H790 373 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 KLRF1Q9NZS2 232 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 ATP6V1HQ9UI12 483 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 RAP2CQ9Y3L5 183 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 OR10H1Q9Y4A9 318 aa18.74■□□□□ 0.59
VTI1B-205ENST00000555543 TMEM120BA0PK00 339 aa18.73■□□□□ 0.59
VTI1B-205ENST00000555543 BCKDKO14874 412 aa18.73■□□□□ 0.59
VTI1B-205ENST00000555543 SNPHO15079 494 aa18.73■□□□□ 0.59
VTI1B-205ENST00000555543 IFI6P09912 130 aa18.73■□□□□ 0.59
VTI1B-205ENST00000555543 PTPN6P29350 595 aa18.73■□□□□ 0.59
VTI1B-205ENST00000555543 SLC30A6Q6NXT4 461 aa18.73■□□□□ 0.59
VTI1B-205ENST00000555543 EID3Q8N140 333 aa18.73■□□□□ 0.59
VTI1B-205ENST00000555543 RNF138Q8WVD3 245 aa18.73■□□□□ 0.59
VTI1B-205ENST00000555543 ZBED6CLQ96FA7 236 aaPredicted RBP18.73■□□□□ 0.59
VTI1B-205ENST00000555543 PAIP2Q9BPZ3 127 aaKnown RBP18.73■□□□□ 0.59
VTI1B-205ENST00000555543 FAM215AQ9Y5M1 114 aa18.73■□□□□ 0.59
VTI1B-205ENST00000555543 ADGRG4Q8IZF6 3080 aa18.73■□□□□ 0.59
VTI1B-205ENST00000555543 TEX15Q9BXT5 2789 aa18.73■□□□□ 0.59
VTI1B-205ENST00000555543 ABCB7O75027 752 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 HPNP05981 417 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 FREM3P0C091 2139 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 AGAP20933 346 aa18.72■□□□□ 0.59
VTI1B-205ENST00000555543 GRK2P25098 689 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms