RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 EXOSC3Q9NQT5 275 aaKnown RBP1.42□□□□□ -2.18
SRP54-207ENST00000555535 MARCH5Q9NX47 278 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 ONECUT1Q9UBC0 465 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 PHF11Q9UIL8 331 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 BARX2Q9UMQ3 279 aaPredicted RBP1.42□□□□□ -2.18
SRP54-207ENST00000555535 FAM149AA5PLN7 773 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 EI24O14681 340 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 GLCEO94923 617 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 CD1BP29016 333 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 KRT20P35900 424 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 NUDT1P36639 197 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 KCNK10P57789 538 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 RPL32P62910 135 aaKnown RBP1.41□□□□□ -2.18
SRP54-207ENST00000555535 STX1AQ16623 288 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 RTL6Q6ICC9 239 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 PRR5LQ6MZQ0 368 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 C20orf203Q8NBC4 194 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 SUMF2Q8NBJ7 301 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 OR52J3Q8NH60 311 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 C7orf33Q8WU49 177 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 HAS2Q92819 552 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 LHX4Q969G2 390 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 NEIL2Q969S2 332 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 TMEM101Q96IK0 257 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 SLC17A9Q9BYT1 436 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 NAP1L2Q9ULW6 460 aaPredicted RBP1.41□□□□□ -2.18
SRP54-207ENST00000555535 KCNK6Q9Y257 313 aa1.41□□□□□ -2.18
SRP54-207ENST00000555535 ITGB4P16144 1822 aa1.4□□□□□ -2.18
SRP54-207ENST00000555535 COL5A1P20908 1838 aaPredicted RBP1.4□□□□□ -2.18
SRP54-207ENST00000555535 TRAV34A0A0B4J273 112 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 SDR42E2A6NKP2 422 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 PDLIM1O00151 329 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 ECDO95905 644 aaPredicted RBP1.4□□□□□ -2.19
SRP54-207ENST00000555535 SLC16A8O95907 504 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 FRKP42685 505 aaPredicted RBP1.4□□□□□ -2.19
SRP54-207ENST00000555535 SUCLG1P53597 346 aaKnown RBP1.4□□□□□ -2.19
SRP54-207ENST00000555535 OTUD4Q01804 1114 aaKnown RBP1.4□□□□□ -2.19
SRP54-207ENST00000555535 SMC1AQ14683 1233 aaKnown RBP1.4□□□□□ -2.19
SRP54-207ENST00000555535 TOMM20Q15388 145 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 CAMK4Q16566 473 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 EOGTQ5NDL2 527 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 MPP7Q5T2T1 576 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 KLHL7Q8IXQ5 586 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 SAXO1Q8IYX7 474 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 NUP93Q8N1F7 819 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 CSNK1A1LQ8N752 337 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 OR4F17Q8NGA8 305 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 GLYATL1Q969I3 302 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 FAM46BQ96A09 425 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 HAVCR1Q96D42 359 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 OR4F4Q96R69 305 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 CITED2Q99967 270 aaPredicted RBP1.4□□□□□ -2.19
SRP54-207ENST00000555535 FUNDC2Q9BWH2 189 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 MMP26Q9NRE1 261 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 LCMT1Q9UIC8 334 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 TRMT6Q9UJA5 497 aaKnown RBP1.4□□□□□ -2.19
SRP54-207ENST00000555535 KLHDC2Q9Y2U9 406 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 THSD7BQ9C0I4 1608 aa1.4□□□□□ -2.19
SRP54-207ENST00000555535 ANKRD30BQ9BXX2 1392 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 PLEKHG1Q9ULL1 1385 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 IGLV4-69A0A075B6H9 119 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.39□□□□□ -2.19
SRP54-207ENST00000555535 A0A0J9YXY3 114 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 TMX2-CTNND1H3BSU7 103 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 BBOX1O75936 387 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 GH1P01241 217 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 C8orf89P0DMQ9 161 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 RCC1P18754 421 aaPredicted RBP1.39□□□□□ -2.19
SRP54-207ENST00000555535 HTR1EP28566 365 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 GP5P40197 560 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 ZNF136P52737 540 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 RAG2P55895 527 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 TIMM10P62072 90 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 PDE7AQ13946 482 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 SHROOM1Q2M3G4 852 aaPredicted RBP1.39□□□□□ -2.19
SRP54-207ENST00000555535 KPRPQ5T749 579 aaPredicted RBP1.39□□□□□ -2.19
SRP54-207ENST00000555535 CDC42EP5Q6NZY7 148 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 ASRGL1Q7L266 308 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 PPP1R27Q86WC6 154 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 ALLCQ8N6M5 410 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 MDS2Q8NDY4 140 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 BLOC1S5Q8TDH9 187 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 ARNTL2Q8WYA1 636 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 EPSTI1Q96J88 318 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 SMIM14Q96QK8 99 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 PANX3Q96QZ0 392 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 MBOAT4Q96T53 435 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 TUFT1Q9NNX1 390 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 INPP5EQ9NRR6 644 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 FBXL5Q9UKA1 691 aa1.39□□□□□ -2.19
SRP54-207ENST00000555535 A6NDX4 124 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 NPIPB7O75200 414 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 IGHV4-34P06331 123 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 CPA3P15088 417 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 SDC1P18827 310 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 CCNCP24863 283 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 NF2P35240 595 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 LHX2P50458 406 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 HERVK_113P61574 105 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 EXOSC7Q15024 291 aaKnown RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms