RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 SHFQ7M4L6 423 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 TRIM73Q86UV7 250 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 SLC35F2Q8IXU6 374 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 CMIPQ8IY22 773 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 RHBDD1Q8TEB9 315 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 FOXN4Q96NZ1 517 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 GJD2Q9UKL4 321 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 MEIS3P1A6NDR6 274 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 SH2D7A6NKC9 451 aaPredicted RBP6.56□□□□□ -1.36
SYNE2-216ENST00000555002 TERTO14746 1132 aaKnown RBP6.56□□□□□ -1.36
SYNE2-216ENST00000555002 ITM2AO43736 263 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 MT-ND2P03891 347 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 PGCP20142 388 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 FCER1GP30273 86 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 PITPNBP48739 271 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 SCAPQ12770 1279 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 ZBED5Q49AG3 693 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 ASRGL1Q7L266 308 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 CD320Q9NPF0 282 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 PCDHGA7Q9Y5G6 932 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 DLC1Q96QB1 1528 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 MEIS3P2A8K0S8 358 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 OR10J4P0C629 311 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 PRKCIP41743 596 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 STT3AP46977 705 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 GDF10P55107 478 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 MAP4K2Q12851 820 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 TECPR1Q7Z6L1 1165 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 GRAMD2AQ8IUY3 354 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 LRRC25Q8N386 305 aaPredicted RBP6.56□□□□□ -1.36
SYNE2-216ENST00000555002 TESQ9UGI8 421 aaKnown RBP6.56□□□□□ -1.36
SYNE2-216ENST00000555002 INMT-MINDY4F8WBC2 141 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 OIP5O43482 229 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 STK19P49842 368 aaPredicted RBP6.56□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF33BQ06732 778 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 STEAP4Q687X5 459 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 KCNIP4Q6PIL6 250 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 C15orf52Q6ZUT6 534 aaKnown RBP6.56□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF367Q7RTV3 350 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 CLEC1AQ8NC01 280 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 OR4K13Q8NH42 304 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 NSUN3Q9H649 340 aaKnown RBP6.56□□□□□ -1.36
SYNE2-216ENST00000555002 SRRDQ9UH36 339 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 RHBDD3Q9Y3P4 386 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 DOCK7Q96N67 2140 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 CNIH1O95406 144 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 UCHL1P09936 223 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 IMPDH1P20839 514 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 FABP6P51161 128 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 SLC22A6Q4U2R8 563 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 ATOH1Q92858 354 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 PAK1IP1Q9NWT1 392 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 TMED5Q9Y3A6 229 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 CEP250Q9BV73 2442 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 TRPM6Q9BX84 2022 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 CHD2O14647 1828 aaKnown RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 SLC31A2O15432 143 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 TIMM8AO60220 97 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 ALDOAP04075 364 aaKnown RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 CHRM4P08173 479 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 G6PDP11413 515 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 DNASE1P24855 282 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 RPS15AP62244 130 aaKnown RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 TMEM110Q86TL2 294 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 NATD1Q8N6N6 113 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 OR51L1Q8NGJ5 315 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 CNIH3Q8TBE1 160 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 FUBP3Q96I24 572 aaKnown RBP eCLIP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 CNTNAP3BQ96NU0 1288 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 OLAHQ9NV23 265 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 SLC7A8Q9UHI5 535 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 MAN2B1O00754 1011 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 PAHP00439 452 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 GNB2P62879 340 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 BRICD5Q6PL45 260 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 OR2AP1Q8NGE2 309 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 EBF4Q9BQW3 602 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 SUSD2Q9UGT4 822 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 CRYM-AS1A6NIL9 109 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 STMND1H3BQB6 276 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 GSK3AP49840 483 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 POU4F2Q12837 409 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 ARHGAP11AQ6P4F7 1023 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 IL34Q6ZMJ4 242 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 CERS5Q8N5B7 392 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 HS6ST2Q96MM7 605 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 CPEB1Q9BZB8 566 aaKnown RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 STARD5Q9NSY2 213 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 SEC14L4Q9UDX3 406 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 PUS1Q9Y606 427 aaKnown RBP eCLIP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 EFCAB7A8K855 629 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 TSTD3H0UI37 97 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 APOA2P02652 100 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 TFPTP0C1Z6 253 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 RPL35P42766 123 aaKnown RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 SIRPAP78324 504 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 USP51Q70EK9 711 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 MAMDC2Q7Z304 686 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-216ENST00000555002 KCTD20Q7Z5Y7 419 aa6.55□□□□□ -1.36
SYNE2-216ENST00000555002 KIAA0907Q7Z7F0 614 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms