RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ERVK-8P63133 956 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 PAX8Q06710 450 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 FCHO2Q0JRZ9 810 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 BNIP1Q12981 228 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 CD226Q15762 336 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 ANKRD55Q3KP44 614 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 TMEM52BQ4KMG9 183 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 C9orf66Q5T8R8 295 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 LEMD1Q68G75 181 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 DMKNQ6E0U4 476 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-213ENST00000554776 PRR5LQ6MZQ0 368 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 SLC25A24Q6NUK1 477 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 ZNF562Q6V9R5 426 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 ZNF841Q6ZN19 808 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 PAQR9Q6ZVX9 377 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 MOB2Q70IA6 237 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 EFCAB13Q8IY85 973 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 CCDC36Q8IYA8 594 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 GCNT2Q8N0V5 402 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 SPEM1Q8N4L4 309 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 ZNF540Q8NDQ6 660 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 NFAM1Q8NET5 270 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-213ENST00000554776 IPMKQ8NFU5 416 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 DLX4Q92988 240 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-213ENST00000554776 ART4Q93070 314 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 RAB7BQ96AH8 199 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 C4orf36Q96KX1 117 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 TESK2Q96S53 571 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 RBM24Q9BX46 236 aaKnown RBP2.49□□□□□ -2.01
SCFD1-213ENST00000554776 ERVK-6Q9BXR3 956 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 TSPY26PQ9H489 355 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 TUBB1Q9H4B7 451 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 RHOJQ9H4E5 214 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 RPAP3Q9H6T3 665 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-213ENST00000554776 HEXA-AS1Q9H8Q6 139 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 JPT2Q9H910 190 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 TRPV5Q9NQA5 729 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 DCAF13Q9NV06 445 aaKnown RBP2.49□□□□□ -2.01
SCFD1-213ENST00000554776 CTSZQ9UBR2 303 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 GHRLQ9UBU3 117 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 LAMP5Q9UJQ1 280 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 MOB4Q9Y3A3 225 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 U3KQV3 271 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 CUX2O14529 1486 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 IGHV3-16A0A0C4DH30 117 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 LRIT2A6NDA9 550 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 TRABD2BA6NFA1 517 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 CCT8L1PA6NM43 557 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 NDC80O14777 642 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 MCF2LO15068 1137 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 ALOX15BO15296 676 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 CLDN3O15551 220 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 LRRTM2O43300 516 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 TOXO94900 526 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 VENTXO95231 258 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 WNT2P09544 360 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 PAX7P23759 505 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 LMO2P25791 158 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 PPP2R1BP30154 601 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 MFAP2P55001 183 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 KRTAP10-3P60369 221 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 PPIAP62937 165 aaKnown RBP2.48□□□□□ -2.01
SCFD1-213ENST00000554776 MS4A2Q01362 244 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 ZNF85Q03923 595 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 ZNF33BQ06732 778 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 ZP4Q12836 540 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 TFDP1Q14186 410 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 ABRAXAS2Q15018 415 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 PCK2Q16822 640 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 SHROOM1Q2M3G4 852 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-213ENST00000554776 TAF3Q5VWG9 929 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 SLX4IPQ5VYV7 408 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 ARMCX5Q6P1M9 558 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 ATRAIDQ6UW56 229 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 HACD2Q6Y1H2 254 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 NET1Q7Z628 596 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-213ENST00000554776 TSEN54Q7Z6J9 526 aaKnown RBP2.48□□□□□ -2.01
SCFD1-213ENST00000554776 RANBP3LQ86VV4 465 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-213ENST00000554776 C4orf32Q8N8J7 132 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 SLC25A36Q96CQ1 311 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 NTNG2Q96CW9 530 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 DNAJA3Q96EY1 480 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 DHTKD1Q96HY7 919 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-213ENST00000554776 HPDLQ96IR7 371 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 VSTM2LQ96N03 204 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 TSPAN18Q96SJ8 248 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 FAM173AQ9BQD7 235 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 ERP44Q9BS26 406 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 RPP25Q9BUL9 199 aaKnown RBP2.48□□□□□ -2.01
SCFD1-213ENST00000554776 WRAP53Q9BUR4 548 aaKnown RBP2.48□□□□□ -2.01
SCFD1-213ENST00000554776 FICDQ9BVA6 458 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 TPPP3Q9BW30 176 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 GSDMCQ9BYG8 508 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 CENPMQ9NSP4 180 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 AGPAT5Q9NUQ2 364 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 RBM28Q9NW13 759 aaKnown RBP2.48□□□□□ -2.01
SCFD1-213ENST00000554776 DUS2Q9NX74 493 aaKnown RBP2.48□□□□□ -2.01
SCFD1-213ENST00000554776 ARMCX1Q9P291 453 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 MBD2Q9UBB5 411 aa2.48□□□□□ -2.01
SCFD1-213ENST00000554776 EPS15L1Q9UBC2 864 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms