RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 TSPAN2O60636 221 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 SCN2BO60939 215 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 UGT2B11O75310 529 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 TRIM3O75382 744 aaPredicted RBP11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 REM1O75628 298 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 TGDSO95455 350 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 CASP3P42574 277 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 PRKAG1P54619 331 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 WNT3P56703 355 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 UFM1P61960 85 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 PPIAP62937 165 aaKnown RBP11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 KCNJ2P63252 427 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 PHC1P78364 1004 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 ZNF155Q12901 538 aaPredicted RBP11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 GAB1Q13480 694 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 LSM12Q3MHD2 195 aaKnown RBP11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 CYP27C1Q4G0S4 372 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 CMPK2Q5EBM0 449 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 TBCELQ5QJ74 424 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 BICRALQ6AI39 1079 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 NXNQ6DKJ4 435 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 RGS9BPQ6ZS82 235 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 WDR53Q7Z5U6 358 aaPredicted RBP11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 CHERPQ8IWX8 916 aaKnown RBP11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 NUP43Q8NFH3 380 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 OR52N2Q8NGI0 321 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 TESCQ96BS2 214 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 FAM120BQ96EK7 910 aaKnown RBP11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 GIMAP5Q96F15 307 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 SLC35A4Q96G79 324 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 C16orf58Q96GQ5 468 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 TEX37Q96LM6 180 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 COL21A1Q96P44 957 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 ADOQ96SZ5 270 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 TTTY12Q9BZ98 90 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 CXorf36Q9H7Y0 433 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 ZFP64Q9NPA5 681 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 OSGIN2Q9Y236 505 aa11.85□□□□□ -0.51
MTHFD1-208ENST00000554739 USP9YO00507 2555 aaPredicted RBP11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 HECTD1Q9ULT8 2610 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 ASH1LQ9NR48 2969 aaKnown RBP11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 TTC36A6NLP5 189 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 FAM166BA8MTA8 275 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 TFECO14948 347 aaPredicted RBP11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 DIAPH2O60879 1101 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 SNX4O95219 450 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 C6orf47O95873 294 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 GABRA3P34903 492 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 KIR3DL1P43629 444 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 CCT3P49368 545 aaKnown RBP11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 PNLIPRP2P54317 469 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 NME5P56597 212 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 HBA1P69905 142 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 RPP38P78345 283 aaKnown RBP11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 PLGLB1Q02325 96 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 EXOSC6Q5RKV6 272 aaKnown RBP11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 TMEM198Q66K66 360 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 OR4F3Q6IEY1 312 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 MFSD12Q6NUT3 480 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 TMEM81Q6P7N7 255 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 SLC22A16Q86VW1 577 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 TMEM251Q8N6I4 163 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 CDRT4Q8N9R6 151 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 NODALQ96S42 347 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 DOHHQ9BU89 302 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 DEFB127Q9H1M4 99 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 ZDHHC11Q9H8X9 412 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 EQTNQ9NQ60 294 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 OR10H1Q9Y4A9 318 aa11.84□□□□□ -0.51
MTHFD1-208ENST00000554739 PRSS51A0A1B0GVH4 220 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 LRRC3CA6NJW4 275 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 RNASET2O00584 256 aaKnown RBP11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 ATP8B1O43520 1251 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 ABCB7O75027 752 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 SEMA7AO75326 666 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 NKX2-2O95096 273 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 HMGN2P05204 90 aaKnown RBP11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 STSP08842 583 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 RFPL3SP0C7P2 107 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 IDO1P14902 403 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 IL12AP29459 219 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 PTGDSP41222 190 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 MAGEA5P43359 124 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 IDH3AP50213 366 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 CLNS1AP54105 237 aaKnown RBP11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 PRR5P85299 388 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 HSF1Q00613 529 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 SNTA1Q13424 505 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 EFR3AQ14156 821 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 UBAP2LQ14157 1087 aaKnown RBP11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 ZNHIT3Q15649 155 aaPredicted RBP11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 SPANXN4Q5MJ08 99 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 ANXA8L1Q5VT79 327 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 FNDC7Q5VTL7 733 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 ZCCHC12Q6PEW1 402 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 FGD2Q7Z6J4 655 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 CLECL1Q8IZS7 167 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 FAM26EQ8N5C1 309 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 SLC16A11Q8NCK7 471 aa11.83□□□□□ -0.52
MTHFD1-208ENST00000554739 RNF138Q8WVD3 245 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms