RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 FXYD1O00168 92 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 UNC5CO95185 931 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 CBX6O95503 412 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 WDPCPO95876 746 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 PPIBP23284 216 aaKnown RBP11.3□□□□□ -0.6
SHMT2-209ENST00000553949 ABCD3P28288 659 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 TRHRP34981 398 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-209ENST00000553949 CPA2P48052 419 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 KHKP50053 298 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 ST13P50502 369 aaKnown RBP11.3□□□□□ -0.6
SHMT2-209ENST00000553949 MVDP53602 400 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 KCNAB2Q13303 367 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 ART3Q13508 389 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 CAPRIN1Q14444 709 aaKnown RBP11.3□□□□□ -0.6
SHMT2-209ENST00000553949 CYP27C1Q4G0S4 372 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 RUNDC3AQ59EK9 446 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 COX20Q5RI15 118 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.3□□□□□ -0.6
SHMT2-209ENST00000553949 ZNF468Q5VIY5 522 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-209ENST00000553949 TNFAIP8L2Q6P589 184 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-209ENST00000553949 IGFL2Q6UWQ7 119 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 LYPD8Q6UX82 237 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 TMEM156Q8N614 296 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 OR52N2Q8NGI0 321 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 OR5D16Q8NGK9 328 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 ADAMTS15Q8TE58 950 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 ASB15Q8WXK1 588 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 PIK3R3Q92569 461 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 CDS1Q92903 461 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 ROPN1LQ96C74 230 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 SLC35A4Q96G79 324 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 ABHD17AQ96GS6 310 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 ANKRD27Q96NW4 1050 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 OR7D2Q96RA2 312 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 CPPED1Q9BRF8 314 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-209ENST00000553949 SLC39A3Q9BRY0 314 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 OR51I1Q9H343 314 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 PIGUQ9H490 435 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 IKZF5Q9H5V7 419 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 Q9N2J8 555 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 DUSP22Q9NRW4 184 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 RYDENQ9NUL5 291 aaKnown RBP11.3□□□□□ -0.6
SHMT2-209ENST00000553949 GID8Q9NWU2 228 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 PLA2G3Q9NZ20 509 aa11.3□□□□□ -0.6
SHMT2-209ENST00000553949 K7EM74 188 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 CDK2AP1O14519 115 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 ASNA1O43681 348 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 SOX30O94993 753 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 OR6B1O95007 311 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 F10P00742 488 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 PDGFAP04085 211 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 FBXO45P0C2W1 286 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 CD96P40200 585 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 SOX3P41225 446 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 CRATP43155 626 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 MAGEA8P43361 318 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 CYB561P49447 251 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 NUDT2P50583 147 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 HLCSP50747 726 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 ANXA11P50995 505 aaKnown RBP11.29□□□□□ -0.6
SHMT2-209ENST00000553949 ARG2P78540 354 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 TXNL4AP83876 142 aaKnown RBP11.29□□□□□ -0.6
SHMT2-209ENST00000553949 PLCXD2Q0VAA5 305 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 TUBA3CQ13748 450 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 TUBA3EQ6PEY2 450 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 OPN5Q6U736 354 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 HACD2Q6Y1H2 254 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 PRR22Q8IZ63 422 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 SLC34A3Q8N130 599 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 HORMAD2Q8N7B1 307 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 BCORP1Q8N888 145 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 COX18Q8N8Q8 333 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 TM9SF4Q92544 642 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 RAB8BQ92930 207 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 TMBIM1Q969X1 311 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 OMA1Q96E52 524 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 RMND5BQ96G75 393 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-209ENST00000553949 NSL1Q96IY1 281 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 UTP23Q9BRU9 249 aaKnown RBP11.29□□□□□ -0.6
SHMT2-209ENST00000553949 BTBD2Q9BX70 525 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 TRIM8Q9BZR9 551 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 RNF32Q9H0A6 362 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 ADNPQ9H2P0 1102 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 RAD21L1Q9H4I0 556 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 ANKRD10Q9NXR5 420 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 TUBD1Q9UJT1 453 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 CBLCQ9ULV8 474 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 CORO2BQ9UQ03 480 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 ZNF451Q9Y4E5 1061 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 PCDHGB7Q9Y5F8 929 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 PCDHGB3Q9Y5G1 929 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 NPFFR2Q9Y5X5 522 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 KCNE3Q9Y6H6 103 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 PKD1L2Q7Z442 2459 aa11.29□□□□□ -0.6
SHMT2-209ENST00000553949 DSPP15924 2871 aaKnown RBP11.29□□□□□ -0.6
SHMT2-209ENST00000553949 MED13Q9UHV7 2174 aa11.28□□□□□ -0.6
SHMT2-209ENST00000553949 OR5H15A6NDH6 313 aa11.28□□□□□ -0.6
SHMT2-209ENST00000553949 CCT8L1PA6NM43 557 aa11.28□□□□□ -0.6
SHMT2-209ENST00000553949 A8MVJ9 347 aa11.28□□□□□ -0.6
SHMT2-209ENST00000553949 EVPLLA8MZ36 301 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms