RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 ZNF704Q6ZNC4 412 aaPredicted RBP8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 Q6ZPB1 254 aaPredicted RBP8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 TMPRSS9Q7Z410 1059 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 PDZD3Q86UT5 571 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 AMZ2Q86W34 360 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 FAM129CQ86XR2 697 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 TFGQ92734 400 aaPredicted RBP8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 TBC1D20Q96BZ9 403 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 COL21A1Q96P44 957 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 MGLLQ99685 303 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 BHLHE41Q9C0J9 482 aaPredicted RBP8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 GABARAPL1Q9H0R8 117 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 TMEM184CQ9NVA4 438 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 CUEDC1Q9NWM3 386 aaPredicted RBP8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 SLC39A1Q9NY26 324 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 TAS2R7Q9NYW3 318 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 THAP10Q9P2Z0 257 aaPredicted RBP8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 SPATA2Q9UM82 520 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 SAMHD1Q9Y3Z3 626 aaKnown RBP8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 PLXND1Q9Y4D7 1925 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 PRAMEF33A0A0G2JMD5 474 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 LOC102723532A0A0G2JNH3 316 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 RTCAO00442 366 aaKnown RBP8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 MID1O15344 667 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 SULT1B1O43704 296 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 PRAMEF10O60809 474 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 IL3P08700 152 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 DNAJA1P31689 397 aaKnown RBP8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 PBX2P40425 430 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 MAN2A2P49641 1150 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 CSNK2BP67870 215 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 CDK3Q00526 305 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 PDE7AQ13946 482 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 ZNF57Q68EA5 555 aaPredicted RBP8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 HIST2H2AA3Q6FI13 130 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 TMIGD1Q6UXZ0 262 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 MAMSTRQ6ZN01 415 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 TRILQ7L0X0 811 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 ZNF605Q86T29 641 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 RNF130Q86XS8 419 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 KLK6Q92876 244 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 RAD51AP1Q96B01 352 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 SLC35A5Q9BS91 424 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 HDAC8Q9BY41 377 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 CDCP1Q9H5V8 836 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 IGFLR1Q9H665 355 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 COPZ2Q9P299 210 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 TAC3Q9UHF0 121 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 TMCC3Q9ULS5 477 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 YBX2Q9Y2T7 364 aaKnown RBP8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 OR1A2Q9Y585 309 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 MAB21L2Q9Y586 359 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 DENND4AQ7Z401 1863 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 A0A1W2PPL8 197 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 A0A1W2PQL4 384 aaPredicted RBP8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 PRAMEF25A6NGN4 478 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 C1QTNF3-AMACRE9PGA6 284 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 SLC30A4O14863 429 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 PCDH17O14917 1159 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 PLA2G10O15496 165 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 LATO43561 262 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 KAT7O95251 611 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 APOC1P02654 83 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 ACSM4P0C7M7 580 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 LBX1P52954 281 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 RUNX3Q13761 415 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 ZNF169Q14929 603 aaPredicted RBP8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 COL28A1Q2UY09 1125 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 C2orf27AQ580R0 203 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 C10orf62Q5T681 223 aaPredicted RBP8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 AGBL4Q5VU57 503 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 GPR139Q6DWJ6 353 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 UNC5DQ6UXZ4 953 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 ADAMTSL4Q6UY14 1074 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 ENTHD1Q8IYW4 607 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 GOT1L1Q8NHS2 421 aaPredicted RBP8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 UTP15Q8TED0 518 aaKnown RBP8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 GGHQ92820 318 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 PPCDCQ96CD2 204 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 KCNC2Q96PR1 638 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 MENTQ9BUN1 341 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 RBCK1Q9BYM8 510 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 ABCG4Q9H172 646 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 SFXN1Q9H9B4 322 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 ZNF282Q9UDV7 671 aaPredicted RBP8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 MLXQ9UH92 298 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 NDRG4Q9ULP0 352 aaKnown RBP8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 ZNF451Q9Y4E5 1061 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 PCDHGA9Q9Y5G4 932 aaKnown RBP8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 KLK4Q9Y5K2 254 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 AUP1Q9Y679 476 aa8.52□□□□□ -1.05
AL049839.2-201ENST00000553947 FEZF1A0PJY2 475 aa8.51□□□□□ -1.05
AL049839.2-201ENST00000553947 CLCA1A8K7I4 914 aa8.51□□□□□ -1.05
AL049839.2-201ENST00000553947 GPR37L1O60883 481 aa8.51□□□□□ -1.05
AL049839.2-201ENST00000553947 PCDH8O95206 1070 aa8.51□□□□□ -1.05
AL049839.2-201ENST00000553947 TPOP07202 933 aa8.51□□□□□ -1.05
AL049839.2-201ENST00000553947 FPR1P21462 350 aa8.51□□□□□ -1.05
AL049839.2-201ENST00000553947 PCGF2P35227 344 aa8.51□□□□□ -1.05
AL049839.2-201ENST00000553947 ITGA1P56199 1179 aa8.51□□□□□ -1.05
AL049839.2-201ENST00000553947 PSPHP78330 225 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms