RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 EXD2Q9NVH0 621 aa13.17□□□□□ -0.3
ABCD4-219ENST00000553745 BLOC1S6Q9UL45 172 aa13.17□□□□□ -0.3
ABCD4-219ENST00000553745 NDRG4Q9ULP0 352 aaKnown RBP13.17□□□□□ -0.3
ABCD4-219ENST00000553745 PCDHGB3Q9Y5G1 929 aa13.17□□□□□ -0.3
ABCD4-219ENST00000553745 PRAMEF25A6NGN4 478 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 H3BMQ9 156 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 ARAFP10398 606 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 CSNK2A2P19784 350 aaPredicted RBP13.16□□□□□ -0.3
ABCD4-219ENST00000553745 ITIH1P19827 911 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 UQCRC2P22695 453 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 AQP1P29972 269 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 CASP9P55211 416 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 SCARB2Q14108 478 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 DSG2Q14126 1118 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 IL11RAQ14626 422 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 LTB4RQ15722 352 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 ISXQ2M1V0 245 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 CRB2Q5IJ48 1285 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 ARHGAP40Q5TG30 622 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 LRRC25Q8N386 305 aaPredicted RBP13.16□□□□□ -0.3
ABCD4-219ENST00000553745 SETD9Q8NE22 299 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 OR9A2Q8NGT5 310 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 COL26A1Q96A83 441 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 TAMM41Q96BW9 452 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 COG8Q96MW5 612 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 NAA50Q9GZZ1 169 aaKnown RBP13.16□□□□□ -0.3
ABCD4-219ENST00000553745 RIBC2Q9H4K1 309 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 ZNF304Q9HCX3 659 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 PAK1IP1Q9NWT1 392 aaPredicted RBP13.16□□□□□ -0.3
ABCD4-219ENST00000553745 THUMPD1Q9NXG2 353 aaKnown RBP13.16□□□□□ -0.3
ABCD4-219ENST00000553745 NDUFAF4Q9P032 175 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 MRPS33Q9Y291 106 aaKnown RBP13.16□□□□□ -0.3
ABCD4-219ENST00000553745 LOXL2Q9Y4K0 774 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 MAP4K5Q9Y4K4 846 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 SNX8Q9Y5X2 465 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 SEC16AO15027 2179 aa13.16□□□□□ -0.3
ABCD4-219ENST00000553745 CFAP54Q96N23 3096 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 TGFBR3LH3BV60 316 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 POLR1CO15160 346 aaPredicted RBP13.15□□□□□ -0.3
ABCD4-219ENST00000553745 B4GALT2O60909 372 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 CSO75390 466 aaKnown RBP13.15□□□□□ -0.3
ABCD4-219ENST00000553745 KRT75O95678 551 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 FHP07954 510 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 MATN1P21941 496 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 GPC1P35052 558 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 XKP51811 444 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 LIMK1P53667 647 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 PCBP3P57721 371 aaKnown RBP13.15□□□□□ -0.3
ABCD4-219ENST00000553745 NUP107P57740 925 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 MC2RQ01718 297 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 NHLH1Q02575 133 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 ZNF630Q2M218 657 aaPredicted RBP13.15□□□□□ -0.3
ABCD4-219ENST00000553745 HES3Q5TGS1 186 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 COX15Q7KZN9 410 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 SLCO6A1Q86UG4 719 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 RNF130Q86XS8 419 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 NFKBIDQ8NI38 313 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 TANKQ92844 425 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 ANKRD9Q96BM1 317 aaPredicted RBP13.15□□□□□ -0.3
ABCD4-219ENST00000553745 CLIP3Q96DZ5 547 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 PITX2Q99697 317 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 CMKLR1Q99788 373 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 YIPF2Q9BWQ6 316 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 LHPPQ9H008 270 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 TRPC4Q9UBN4 977 aa13.15□□□□□ -0.3
ABCD4-219ENST00000553745 HEMK1Q9Y5R4 338 aaPredicted RBP13.15□□□□□ -0.3
ABCD4-219ENST00000553745 SPAARA0A1B0GVQ0 90 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 PMS2P1A4D2B8 440 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 OR2W5A6NFC9 320 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 MT-CO3P00414 261 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 CPMP14384 443 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 PCMT1P22061 227 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 ETV5P41161 510 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 TMBIM6P55061 237 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 CXCR4P61073 352 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 CDK6Q00534 326 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 SLC13A2Q13183 592 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 TMEM107Q6UX40 140 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 ANGPTL8Q6UXH0 198 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 BPHLQ86WA6 291 aaPredicted RBP13.15□□□□□ -0.31
ABCD4-219ENST00000553745 ZC3H7AQ8IWR0 971 aaKnown RBP13.15□□□□□ -0.31
ABCD4-219ENST00000553745 ZNF595Q8IYB9 648 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 OR4C15Q8NGM1 316 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 PSMA8Q8TAA3 256 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 CNIH3Q8TBE1 160 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 STRADBQ9C0K7 418 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 FBXO8Q9NRD0 319 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 PRTFDC1Q9NRG1 225 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 THSD1Q9NS62 852 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 LANCL2Q9NS86 450 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 SLC22A11Q9NSA0 550 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 KRT84Q9NSB2 600 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 AKAP7Q9P0M2 348 aaPredicted RBP13.15□□□□□ -0.31
ABCD4-219ENST00000553745 PCDHGB1Q9Y5G3 927 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 LYVE1Q9Y5Y7 322 aa13.15□□□□□ -0.31
ABCD4-219ENST00000553745 CCDC88CQ9P219 2028 aa13.14□□□□□ -0.31
ABCD4-219ENST00000553745 ZFHX2Q9C0A1 2572 aaPredicted RBP13.14□□□□□ -0.31
ABCD4-219ENST00000553745 A0A1B0GVG6 124 aa13.14□□□□□ -0.31
ABCD4-219ENST00000553745 BLACEA4D250 179 aa13.14□□□□□ -0.31
ABCD4-219ENST00000553745 CPNE3O75131 537 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms