RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 FABP12A6NFH5 140 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 OR52A4PA6NMU1 304 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 CACNB4O00305 520 aaPredicted RBP6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 STK25O00506 426 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 SLC9A3R1O14745 358 aaPredicted RBP6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 POLR1CO15160 346 aaPredicted RBP6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 PRODHO43272 600 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 ERI3O43414 337 aaKnown RBP6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 TMCC2O75069 709 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 SLC2A10O95528 541 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 FGF19O95750 216 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 ADH1CP00326 375 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 TIMP1P01033 207 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 EIF2S1P05198 315 aaKnown RBP6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 MYL12AP19105 171 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 CXCR2P25025 360 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 DRD3P35462 400 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 TRIM23P36406 574 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 GPR4P46093 362 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 SLC9A3P48764 834 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 SMSP52788 366 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 CLDN2P57739 230 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 SMIM11AP58511 58 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 ZNF155Q12901 538 aaPredicted RBP6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 NDUFA9Q16795 377 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 PLK5Q496M5 336 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 MINDY4Q4G0A6 757 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 Q5BKY6 102 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 ZNF628Q5EBL2 1059 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 KIAA1161Q6NSJ0 714 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 B3GLCTQ6Y288 498 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 ZNF730Q6ZMV8 503 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 LAPTM4BQ86VI4 370 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 NKAIN4Q8IVV8 208 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 TRIM48Q8IWZ4 208 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 SIMC1Q8NDZ2 872 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 ANKK1Q8NFD2 765 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 OR9A2Q8NGT5 310 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 TEX47Q8TBZ9 253 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 ZFPM2Q8WW38 1151 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 SLC7A6Q92536 515 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 DIO2Q92813 273 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 C12orf66Q96MD2 445 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 KCTD7Q96MP8 289 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 QRFPRQ96P65 431 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 FERD3LQ96RJ6 166 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 BBS4Q96RK4 519 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 SLC38A1Q9H2H9 487 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 BCL2L10Q9HD36 194 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 FGF20Q9NP95 211 aaPredicted RBP6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 IMP3Q9NV31 184 aaKnown RBP6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 TAS2R7Q9NYW3 318 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 COMMD3Q9UBI1 195 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 ADAM29Q9UKF5 820 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 SNX7Q9UNH6 387 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 MRPS23Q9Y3D9 190 aaKnown RBP6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 ASB4Q9Y574 426 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 ATG2AQ2TAZ0 1938 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 TRANK1O15050 2925 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 CENPVL1A0A0U1RR11 272 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 TMEM129A0AVI4 362 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 KDM4EB2RXH2 506 aaPredicted RBP6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 HPGDSO60760 199 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 CLEC3AO75596 197 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 NR2F6P10588 404 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 ACADMP11310 421 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 PEBP1P30086 187 aaKnown RBP6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 NTSP30990 170 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 WASP42768 502 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 SLC1A3P43003 542 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 OMPP47874 163 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 AVPR1BP47901 424 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 MTNR1AP48039 350 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 RNF144AP50876 292 aaPredicted RBP6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 TAS2R41P59536 307 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 RAB8AP61006 207 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 HTRA3P83110 453 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 SCN1BQ07699 218 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 RAB40BQ12829 278 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 COX10Q12887 443 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 FZD5Q13467 585 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 TPBGQ13641 420 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 TCEA2Q15560 299 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 PYDC2Q56P42 97 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 C6orf132Q5T0Z8 1188 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 SLC35F1Q5T1Q4 408 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 DDI2Q5TDH0 399 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 PPP2R2DQ66LE6 453 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 TYW3Q6IPR3 259 aaKnown RBP6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 KIAA1211LQ6NV74 962 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 SLC27A4Q6P1M0 643 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 XKRXQ6PP77 449 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 MRGPREQ86SM8 312 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 GALNT12Q8IXK2 581 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 RDH10Q8IZV5 341 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 SHISA5Q8N114 240 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 NATD1Q8N6N6 113 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 UFD1Q92890 307 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 MS4A6EQ96DS6 147 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms