RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 EXOGQ9Y2C4 368 aaKnown RBP4.18□□□□□ -1.74
SCFD1-209ENST00000553280 MEX3AA1L020 520 aaKnown RBP4.17□□□□□ -1.74
SCFD1-209ENST00000553280 PPIAL4DF5H284 164 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 K7ERI5 159 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 CTAGE5O15320 804 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 MTX2O75431 263 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 PDE5AO76074 875 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 DUS4LO95620 317 aaKnown RBP4.17□□□□□ -1.74
SCFD1-209ENST00000553280 ANP32DO95626 131 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 HOXB7P09629 217 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 OR9G9P0C7N8 305 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 RPS2P15880 293 aaKnown RBP4.17□□□□□ -1.74
SCFD1-209ENST00000553280 UCP1P25874 307 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 CALML3P27482 149 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 CA8P35219 290 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 PTGER3P43115 390 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 HAND2P61296 217 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 SRPXP78539 464 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 LRRC74AQ0VAA2 488 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 IL24Q13007 206 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 CALCOCO2Q13137 446 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 RIPK1Q13546 671 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 SELPLGQ14242 412 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 FASTKD3Q14CZ7 662 aaKnown RBP4.17□□□□□ -1.74
SCFD1-209ENST00000553280 MAJINQ3KP22 176 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 OR52J3Q8NH60 311 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 GTF3AQ92664 365 aaKnown RBP4.17□□□□□ -1.74
SCFD1-209ENST00000553280 ART4Q93070 314 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 BIRC7Q96CA5 298 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 ELMO2Q96JJ3 720 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 IWS1Q96ST2 819 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 HSD17B14Q9BPX1 270 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 RBM4Q9BWF3 364 aaKnown RBP4.17□□□□□ -1.74
SCFD1-209ENST00000553280 GSDMCQ9BYG8 508 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 TRIM6Q9C030 488 aaPredicted RBP4.17□□□□□ -1.74
SCFD1-209ENST00000553280 DHX33Q9H6R0 707 aaKnown RBP4.17□□□□□ -1.74
SCFD1-209ENST00000553280 MOB1AQ9H8S9 216 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 DCAF13Q9NV06 445 aaKnown RBP4.17□□□□□ -1.74
SCFD1-209ENST00000553280 RBM28Q9NW13 759 aaKnown RBP4.17□□□□□ -1.74
SCFD1-209ENST00000553280 TAS2R16Q9NYV7 291 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 THEGQ9P2T0 379 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 SEC14L4Q9UDX3 406 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 ZNF346Q9UL40 294 aaKnown RBP4.17□□□□□ -1.74
SCFD1-209ENST00000553280 HPCAL4Q9UM19 191 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 OR10H1Q9Y4A9 318 aa4.17□□□□□ -1.74
SCFD1-209ENST00000553280 PTCH1Q13635 1447 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 ATP10DQ9P241 1426 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 PPIAL4CA0A0B4J2A2 164 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 MBLAC1A4D2B0 266 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-209ENST00000553280 SNAP91O60641 907 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 BCAS1O75363 584 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-209ENST00000553280 SNX4O95219 450 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 ADCY5O95622 1261 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 MT-ND1P03886 318 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 UGT2B4P06133 528 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 PPIAL4GP0DN37 164 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 RGS4P49798 205 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 SLC7A2P52569 658 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 OSTNP61366 133 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 UBE2HP62256 183 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 NECTIN1Q15223 517 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 MS4A18Q3C1V0 323 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 KRTAP24-1Q3LI83 254 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 BLOC1S2Q6QNY1 142 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 BTNL3Q6UXE8 466 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 HACD2Q6Y1H2 254 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 STOX1Q6ZVD7 989 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 USP43Q70EL4 1123 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 LRRC70Q7Z2Q7 622 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 AQP11Q8NBQ7 271 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 PNPT1Q8TCS8 783 aaKnown RBP4.16□□□□□ -1.74
SCFD1-209ENST00000553280 RAET1EQ8TD07 263 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 SSC4DQ8WTU2 575 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 SPRYD4Q8WW59 207 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-209ENST00000553280 UPRTQ96BW1 309 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 TBC1D10AQ9BXI6 508 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 GPN2Q9H9Y4 310 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-209ENST00000553280 IL1RL2Q9HB29 575 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 ELL3Q9HB65 397 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-209ENST00000553280 DUS2Q9NX74 493 aaKnown RBP4.16□□□□□ -1.74
SCFD1-209ENST00000553280 EIF3LQ9Y262 564 aaKnown RBP4.16□□□□□ -1.74
SCFD1-209ENST00000553280 FBXO7Q9Y3I1 522 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 SALL1Q9NSC2 1324 aa4.16□□□□□ -1.74
SCFD1-209ENST00000553280 IGLV7-46A0A075B6I9 117 aa4.15□□□□□ -1.75
SCFD1-209ENST00000553280 TRGV8A0A0C4DH27 118 aa4.15□□□□□ -1.75
SCFD1-209ENST00000553280 GSAPA4D1B5 854 aa4.15□□□□□ -1.75
SCFD1-209ENST00000553280 PRR23AA6NEV1 266 aa4.15□□□□□ -1.75
SCFD1-209ENST00000553280 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.15□□□□□ -1.75
SCFD1-209ENST00000553280 NTN3O00634 580 aaPredicted RBP4.15□□□□□ -1.75
SCFD1-209ENST00000553280 CXCL11O14625 94 aa4.15□□□□□ -1.75
SCFD1-209ENST00000553280 OR1F1O43749 312 aa4.15□□□□□ -1.75
SCFD1-209ENST00000553280 TYROBPO43914 113 aa4.15□□□□□ -1.75
SCFD1-209ENST00000553280 FCGR3AP08637 254 aa4.15□□□□□ -1.75
SCFD1-209ENST00000553280 NT5EP21589 574 aa4.15□□□□□ -1.75
SCFD1-209ENST00000553280 PPT1P50897 306 aa4.15□□□□□ -1.75
SCFD1-209ENST00000553280 NDUFV3P56181 108 aaKnown RBP4.15□□□□□ -1.75
SCFD1-209ENST00000553280 CBX1P83916 185 aa4.15□□□□□ -1.75
SCFD1-209ENST00000553280 ZNF85Q03923 595 aa4.15□□□□□ -1.75
SCFD1-209ENST00000553280 LY6DQ14210 128 aa4.15□□□□□ -1.75
SCFD1-209ENST00000553280 CYBRD1Q53TN4 286 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms