RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 MAGOHP61326 146 aaKnown RBP10.82□□□□□ -0.68
CKAP4-202ENST00000552828 GALNT1Q10472 559 aaPredicted RBP10.82□□□□□ -0.68
CKAP4-202ENST00000552828 FUT7Q11130 342 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 CSTF3Q12996 717 aaKnown RBP10.82□□□□□ -0.68
CKAP4-202ENST00000552828 DEFB113Q30KQ7 82 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 BICRALQ6AI39 1079 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 TMEM64Q6YI46 380 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 PACS2Q86VP3 889 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 METTL4Q8N3J2 472 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 ZNF615Q8N8J6 731 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 C17orf47Q8NEP4 570 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 MBD3L2Q8NHZ7 208 aaPredicted RBP10.82□□□□□ -0.68
CKAP4-202ENST00000552828 PPP1R14CQ8TAE6 165 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 DOK4Q8TEW6 326 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 ADIPOR1Q96A54 375 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 HSPBAP1Q96EW2 488 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 WDYHV1Q96HA8 205 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 PKNOX2Q96KN3 472 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 RILPQ96NA2 401 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 GNRHR2Q96P88 292 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 KCNA7Q96RP8 456 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 HBEGFQ99075 208 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 MRPL1Q9BYD6 325 aaKnown RBP10.82□□□□□ -0.68
CKAP4-202ENST00000552828 SHCBP1LQ9BZQ2 653 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 ADAM29Q9UKF5 820 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 NPFFR2Q9Y5X5 522 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 SERTM1A2A2V5 107 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 WDR91A4D1P6 747 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 GLOD5A6NK44 160 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 AZIN1O14977 448 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 TRAPPC6AO75865 159 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 AIFM1O95831 613 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 KLK1P06870 262 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 UROSP10746 265 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 BMP7P18075 431 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 CTSSP25774 331 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 SSTR4P31391 388 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 OPRM1P35372 400 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 CASP3P42574 277 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 TMED10P49755 219 aaKnown RBP10.81□□□□□ -0.68
CKAP4-202ENST00000552828 SLC18A1P54219 525 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 FOXA1P55317 472 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 MPP2Q14168 576 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 ARL13AQ5H913 290 aaPredicted RBP10.81□□□□□ -0.68
CKAP4-202ENST00000552828 CCNYL2Q5T2Q4 361 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 AGBL2Q5U5Z8 902 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 HHATQ5VTY9 493 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 TIGD3Q6B0B8 471 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 TMEM81Q6P7N7 255 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 ZCCHC23Q6ZST2 131 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 BIVMQ86UB2 503 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 GOLGA6L1Q8N7Z2 621 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 ZPLD1Q8TCW7 415 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 TLCD1Q96CP7 247 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 TMEM41AQ96HV5 264 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 UGT2B28Q9BY64 529 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 VIPAS39Q9H9C1 493 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 WDR41Q9HAD4 459 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 TEX10Q9NXF1 929 aaPredicted RBP10.81□□□□□ -0.68
CKAP4-202ENST00000552828 SLC6A5Q9Y345 797 aa10.81□□□□□ -0.68
CKAP4-202ENST00000552828 TMEM120BA0PK00 339 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 PGRMC2O15173 223 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 GUCY1B2O75343 617 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 CHEK2O96017 543 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 GBAP04062 536 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 CHRNGP07510 517 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 ABCB1P08183 1280 aaPredicted RBP10.8□□□□□ -0.68
CKAP4-202ENST00000552828 FGF4P08620 206 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 DHRS4L1P0CG22 281 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 NEFHP12036 1026 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 DRD2P14416 443 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 CPN1P15169 458 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 CHN1P15882 459 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 NAGAP17050 411 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 S1PR1P21453 382 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 PTPN6P29350 595 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 HTR6P50406 440 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 NRG3P56975 720 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 RPP38P78345 283 aaKnown RBP10.8□□□□□ -0.68
CKAP4-202ENST00000552828 KEAP1Q14145 624 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 IMPG1Q17R60 797 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 EIPR1Q53HC9 387 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 DCST1Q5T197 706 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 FAM219BQ5XKK7 198 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 CLEC6AQ6EIG7 209 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 OR52E8Q6IFG1 317 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 SCIMPQ6UWF3 145 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 COMMD6Q7Z4G1 85 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 TRIM46Q7Z4K8 759 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 ADGRE4PQ86SQ3 457 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 GALNT12Q8IXK2 581 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 C1orf52Q8N6N3 182 aaKnown RBP10.8□□□□□ -0.68
CKAP4-202ENST00000552828 ANKRD42Q8N9B4 389 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 WFDC11Q8NEX6 87 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 OR7G1Q8NGA0 311 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 OR6Y1Q8NGX8 325 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 LINC01560Q8TB33 94 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 UCN3Q969E3 161 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 ABTB1Q969K4 478 aaPredicted RBP10.8□□□□□ -0.68
CKAP4-202ENST00000552828 DACH2Q96NX9 599 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms