RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 DYRK4Q9NR20 520 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 TUBA8Q9NY65 449 aaPredicted RBP3.82□□□□□ -1.8
USP44-208ENST00000552440 PTTG2Q9NZH5 202 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 SENP1Q9P0U3 644 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 PHF11Q9UIL8 331 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 ZNF229Q9UJW7 825 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 EMCNQ9ULC0 261 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 TTC7AQ9ULT0 858 aaPredicted RBP3.82□□□□□ -1.8
USP44-208ENST00000552440 FLVCR2Q9UPI3 526 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 TMED3Q9Y3Q3 217 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 CEP170Q5SW79 1584 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 FNDC1Q4ZHG4 1894 aaPredicted RBP3.81□□□□□ -1.8
USP44-208ENST00000552440 LRRC3CA6NJW4 275 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 A8MUA0 341 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 C17orf105B2RV13 164 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 PROP1O75360 226 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 NDUFB4O95168 129 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 SERPINE2P07093 398 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 CT45A8P0DMV1 189 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 CT45A9P0DMV2 189 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 UNGP13051 313 aaPredicted RBP3.81□□□□□ -1.8
USP44-208ENST00000552440 DARSP14868 501 aaKnown RBP3.81□□□□□ -1.8
USP44-208ENST00000552440 TSPAN8P19075 237 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 PRKAR2BP31323 418 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 CDH5P33151 784 aaPredicted RBP3.81□□□□□ -1.8
USP44-208ENST00000552440 SOX2P48431 317 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 COMPP49747 757 aaPredicted RBP3.81□□□□□ -1.8
USP44-208ENST00000552440 EMP2P54851 167 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 ATP5J2P56134 94 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 KRTAP10-11P60412 298 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 PRPS1P60891 318 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 EEF1A1P68104 462 aaKnown RBP3.81□□□□□ -1.8
USP44-208ENST00000552440 FAM27E3Q08E93 113 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 PEX6Q13608 980 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 CRMP1Q14194 572 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 GK3PQ14409 553 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 MESDQ14696 234 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 VAMP3Q15836 100 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 PSG3Q16557 428 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 CA9Q16790 459 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 CT45A2Q5DJT8 189 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 XKR4Q5GH76 650 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 AARS2Q5JTZ9 985 aaKnown RBP3.81□□□□□ -1.8
USP44-208ENST00000552440 KIAA1755Q5JYT7 1200 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 ZNF658Q5TYW1 1059 aaPredicted RBP3.81□□□□□ -1.8
USP44-208ENST00000552440 EEF1A1P5Q5VTE0 462 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 NCAPH2Q6IBW4 605 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 SLC8B1Q6J4K2 584 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 C11orf63Q6NUN7 778 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 FAM71F2Q6NXP2 309 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 FUT10Q6P4F1 479 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 SLC35D2Q76EJ3 337 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 GOLGA7Q7Z5G4 137 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 ABHD12BQ7Z5M8 362 aaPredicted RBP3.81□□□□□ -1.8
USP44-208ENST00000552440 TFAP2DQ7Z6R9 452 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 SATL1Q86VE3 508 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 TBC1D10CQ8IV04 446 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 SFTPA2Q8IWL1 248 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 TEX26Q8N6G2 289 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 TERB1Q8NA31 727 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 CNBD1Q8NA66 436 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 OR5T1Q8NG75 326 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 OR4D6Q8NGJ1 314 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 OR6M1Q8NGM8 313 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 OR13C3Q8NGS6 347 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 HCAR2Q8TDS4 363 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 SEPT8Q92599 483 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 P3H4Q92791 437 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 SLC25A36Q96CQ1 311 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 CCDC124Q96CT7 223 aaKnown RBP3.81□□□□□ -1.8
USP44-208ENST00000552440 COPS8Q99627 209 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 MACROD1Q9BQ69 325 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 DPH7Q9BTV6 452 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 DPEP2Q9H4A9 486 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 C10orf88Q9H8K7 445 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 POLE4Q9NR33 117 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 ZFP57Q9NU63 452 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 PCDHGB1Q9Y5G3 927 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 PCDHAC2Q9Y5I4 1007 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 TRBV5-7A0A0A0MS05 114 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 HYKKA2RU49 373 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 ZNF840PA6NDX5 716 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 FRG2CA6NGY1 282 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 LINC00473A8K010 186 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 TOR1AO14656 332 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 TPST2O60704 377 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 NEURL1O76050 574 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 TTLL1O95922 423 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 STSP08842 583 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 ALOX5P09917 674 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 ELFN1P0C7U0 828 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 CBSLP0DN79 551 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 EIF2S2P20042 333 aaKnown RBP3.81□□□□□ -1.8
USP44-208ENST00000552440 MMP11P24347 488 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 STOMP27105 288 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 GJB2P29033 226 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 PPP2R1BP30154 601 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 CBSP35520 551 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 MPLP40238 635 aa3.81□□□□□ -1.8
USP44-208ENST00000552440 NKX2-1P43699 371 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms