RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 FRG2Q64ET8 278 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 KLC3Q6P597 504 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 VWA1Q6PCB0 445 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 PLEKHM3Q6ZWE6 761 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 CENPLQ8N0S6 344 aaPredicted RBP12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 MEIOBQ8N635 442 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 OR52R1Q8NGF1 315 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 PPP1R14CQ8TAE6 165 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 TRPC4APQ8TEL6 797 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 KCTD4Q8WVF5 259 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 CAVIN3Q969G5 261 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 TMBIM1Q969X1 311 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 KLHL29Q96CT2 875 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 ZNF845Q96IR2 970 aaPredicted RBP12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 FRG2BQ96QU4 278 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 MRPL1Q9BYD6 325 aaKnown RBP12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 OPN3Q9H1Y3 402 aaPredicted RBP12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 NOL11Q9H8H0 719 aaKnown RBP12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 WHRNQ9P202 907 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 ZNF639Q9UID6 485 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 FBXL2Q9UKC9 423 aa12.83□□□□□ -0.36
CHMP1A-210ENST00000551981 LRRC14BA6NHZ5 514 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 BCAS2O75934 225 aaPredicted RBP12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 CBX7O95931 251 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 TCEA1P23193 301 aaKnown RBP12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 DPP4P27487 766 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 IL12BP29460 328 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 STX2P32856 288 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 CCNG1P51959 295 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 SIRPAP78324 504 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 IRF9Q00978 393 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 IFT88Q13099 833 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 ZNF474Q6S9Z5 364 aaPredicted RBP12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 BTLAQ7Z6A9 289 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 UBQLNLQ8IYU4 475 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 OR4K17Q8NGC6 315 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 TMEM171Q8WVE6 324 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 SLC35A4Q96G79 324 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 ZC3HAV1LQ96H79 300 aaKnown RBP12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 CDK15Q96Q40 435 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 HS3ST6Q96QI5 342 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 ADOQ96SZ5 270 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 FAIM2Q9BWQ8 316 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 CXorf56Q9H5V9 222 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 CPSF2Q9P2I0 782 aaKnown RBP12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 CES1P1Q9UKY3 287 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 SAR1BQ9Y6B6 198 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 ZNF780BQ9Y6R6 833 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 ROS1P08922 2347 aa12.82□□□□□ -0.36
CHMP1A-210ENST00000551981 CHD3Q12873 2000 aaKnown RBP12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 OR7A17O14581 309 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 EMC8O43402 210 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 ZIC3O60481 467 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 TMCC2O75069 709 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 SIX3O95343 332 aaPredicted RBP12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 CD8BP10966 210 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 PAX1P15863 534 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 GRK2P25098 689 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 CCKARP32238 428 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 KIR2DL2P43627 348 aaPredicted RBP12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 EMDP50402 254 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 MRPS22P82650 360 aaKnown RBP12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 TRMT12Q53H54 448 aaKnown RBP12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 OR5M10Q6IEU7 315 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 ZNF550Q7Z398 422 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 COMMD6Q7Z4G1 85 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 METTL4Q8N3J2 472 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 OR52B6Q8NGF0 335 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 MARK4Q96L34 752 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 BTBD9Q96Q07 612 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 DPH5Q9H2P9 285 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 ELOVL6Q9H5J4 265 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 ADAM21Q9UKJ8 722 aa12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 GPR55Q9Y2T6 319 aaPredicted RBP12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 SONP18583 2426 aaKnown RBP12.81□□□□□ -0.36
CHMP1A-210ENST00000551981 UQCRHLA0A096LP55 91 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 CRLF1O75462 422 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 KLHL2O95198 593 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 C2P06681 752 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 PCSK2P16519 638 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 ALDH9A1P49189 494 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 DSCR4P56555 118 aaPredicted RBP12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 MRPS35P82673 323 aaKnown RBP12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 ERCC6LQ2NKX8 1250 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 BEX5Q5H9J7 111 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 LARP4Q71RC2 724 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 ERP27Q96DN0 273 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 PIGQQ9BRB3 760 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 ERP44Q9BS26 406 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 NTMT1Q9BV86 223 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 PFDN4Q9NQP4 134 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 NMRK1Q9NWW6 199 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 PPP4R1LQ9P1A2 415 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 HEY2Q9UBP5 337 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 PROCRQ9UNN8 238 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 SLC12A4Q9UP95 1085 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 ZNF175Q9Y473 711 aa12.8□□□□□ -0.36
CHMP1A-210ENST00000551981 FAM187AA6NFU0 413 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 LINC01387J3KSC0 135 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 TNFRSF21O75509 655 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms